DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstZ1 and vars1

DIOPT Version :10

Sequence 1:NP_649894.1 Gene:GstZ1 / 41132 FlyBaseID:FBgn0037696 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:169 Identity:34/169 - (20%)
Similarity:54/169 - (31%) Gaps:70/169 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VSGHAYTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQD-PVKRAKIREIVE 133
            :|.|  .|::|.:.|:...        ..|.|            .|.:|.|| |.:.|:.|..:.
Zfish     6 ISSH--PDDFRSLLPLIAA--------GFCPS------------PPRILHQDPPAELARSRPALV 48

  Fly   134 LICSGIQPLQNVSVLD--------HIGKD---QSLQWAQHWIS-----------------RGFQG 170
            |..:|...|...|.:.        ..|.|   :|..|  .|:|                 .|..|
Zfish    49 LAGAGGTVLSGTSAVSWYLAATGKRAGSDKKQESQVW--QWLSFAENELTPVACAVAFPLLGIMG 111

  Fly   171 LEKVLSHSA-----------------GKFCVGDELSMAD 192
            ::|.|..|:                 ..|.||:.:::||
Zfish   112 VDKKLQQSSRAELLRVLKALDGTLALRTFLVGESVTLAD 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstZ1NP_649894.1 maiA 35..240 CDD:273527 34/169 (20%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327 14/73 (19%)
PTZ00419 291..1270 CDD:240411
Blue background indicates that the domain is not in the aligned region.

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