DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-IIa and man2a2

DIOPT Version :9

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_001006777.1 Gene:man2a2 / 448465 XenbaseID:XB-GENE-981388 Length:909 Species:Xenopus tropicalis


Alignment Length:955 Identity:391/955 - (40%)
Similarity:569/955 - (59%) Gaps:129/955 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRIRRRFALVICSG---CLLVFLSLYIILNFAAPAATQIKQPNYEN-----------IENKLHEL 52
            ::::::  :.:|..   |:.|| |||::|:     ..|...|..:|           ::|::.:|
 Frog     1 MKLKKQ--VTVCGAAIFCVAVF-SLYLMLD-----KVQHDPPRRQNGGNFPRSQISVLQNRIEQL 57

  Fly    53 ENGLQEHGEEMRNLRARLAE-TSNRD-DPIRPPLKVAR-------SPRPG-------QCQ-DVVQ 100
            |..|:|:.|.:.:::..:.| |:|.: .||..|.....       .|||.       .|| .|..
 Frog    58 EQLLEENHEIISHIKDSVLELTANAEGQPILLPYHTPNGTWVMPPDPRPSFYSVSPQDCQFSVAN 122

  Fly   101 DVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEE 165
            .....|:|||::|.::.|.::||||||||::|.|||.::: :..|:||||||||||||||:||::
 Frog   123 KRQKTDLQMLDVYTQLPFDNVDGGVWKQGFDITYDPKEWD-NEPLQVFVVPHSHNDPGWIKTFDK 186

  Fly   166 YYQHDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWV 230
            ||...|:|||:|.:..||::|..||||:|||:|::::.::...|:..::.:|.:||||..|||||
 Frog   187 YYYDQTQHILNNMVVKLHEDPRRKFIWSEISFFSKWWDNINSQKRAAVRRLVASGQLEMTTGGWV 251

  Fly   231 MPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIDPFGHSPTMPYILQKSGFKNMLIQRTHY 295
            ||||||:|:..::.|:.||..|||:.::.||.:.||:||||||.||||||::|...:|||||.||
 Frog   252 MPDEANTHYFAMIDQMIEGHQWLKKNLDATPRSGWAVDPFGHSSTMPYILRRSNLTSMLIQRVHY 316

  Fly   296 SVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLS 360
            |:||..|..:.|||:|||.||....|.:|.|||||||||:|||||||||:||||||:|:....::
 Frog   317 SIKKHFAATQSLEFMWRQTWDPDSSTDIFCHMMPFYSYDVPHTCGPDPKICCQFDFRRLPGGRIN 381

  Fly   361 CPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLF 425
            ||||||||.|:|.|||.|:::|:||:|||::|||:.|:|:|||||||:.:..|||.|.:||::||
 Frog   382 CPWKVPPRAITDSNVAERANILLDQYKKKSKLYRSKVVLVPLGDDFRYDKIQEWDAQFLNYQKLF 446

  Fly   426 EHINSQAHFNVQAQFGTLQEYFDAVHQAERAG------QAEFPTLSGDFFTYADRSDNYWSGYYT 484
            :::||....:||||||||.:||||::  :|.|      ..:||.:|||||:||||.|:||:||||
 Frog   447 DYMNSHPELHVQAQFGTLSDYFDALY--KRMGVVPGIKPPDFPVVSGDFFSYADREDHYWTGYYT 509

  Fly   485 SRPYHKRMDRVLMHYVRAAEMLSAW---HSWDGMARIEER--------LEQARRELSLFQHHDGI 538
            |||::|.|||||..::|.||:|.:.   |:  ..|..|.:        |..|||.|.||||||.|
 Frog   510 SRPFYKSMDRVLESHLRGAEILYSLAINHA--RKAGTESKYPLSDYALLTDARRNLGLFQHHDAI 572

  Fly   539 TGTAKTHVVVDYEQRMQEAL-KACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVED 602
            |||||..||:||..|:..:| ...::::..:.|.::.....|..|.|..:|:.|:||        
 Frog   573 TGTAKEAVVIDYGVRLLHSLMNLKRIIINAAHYLVVADKEKYHYDHSVPFFSTDESR-------- 629

  Fly   603 SRTTIILGEDILPSK----------HVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVS 657
                  |.::.||.|          :||:.|.:...|..:|...|::..|.|......||.||:|
 Frog   630 ------LTQESLPEKTVIKLTASPRYVVVFNPVEQNRLCVVSLLVNTYNVRVLTEDGQPVAAQLS 688

  Fly   658 PVWSWHHDTLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTIS-DSKPEHTSYASNLLLRKNPT 721
            |||....|     ::|.    .|::.|.||:|.:||:.:.|..| |:   ||:..||:.:..:..
 Frog   689 PVWQSVTD-----MNPD----VYQVSFTARLPSLGLSIFQLHASIDT---HTTLKSNVRVHLHGR 741

  Fly   722 SLPLGQ---YPEDVKFGDPREISLRVGN--------GPTLAFSEQGLLKSIQLTQDSPHVPVHFK 775
            .|.:.:   :|  ||..:.......:.|        |.|      ||||||:...:.....::.:
 Frog   742 ELSIKKQDVFP--VKVAESSTDDFHIENQYMQVWFSGTT------GLLKSIKRAGEEQEQKINMQ 798

  Fly   776 FLKYGVRSHGDRSGAYLFLPNGPASP-VELGQPVVLVTKGKLESSVSVGLPSVVHQTIMR----- 834
            ||.||.|:..|:||||||||:|.|.| .....|||.||:|...|.|:.....|  |.:||     
 Frog   799 FLIYGTRTSKDKSGAYLFLPDGEAKPYTPKDPPVVKVTEGPFYSEVTCQYQHV--QQVMRLYNLP 861

  Fly   835 ---GGAPEIRNLVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQ 876
               |.:.:|.:|:||....|.||.|||.|.|.|.|||:|||||.|
 Frog   862 GTEGLSLDISSLIDIRDHVNKEIAMRLSTDIQSEDIFFTDLNGFQ 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 GH38N_AMII_GMII_SfManIII_like 144..483 CDD:212120 193/344 (56%)
Alpha-mann_mid 478..554 CDD:214875 43/86 (50%)
Glyco_hydro_38C 744..1103 CDD:285047 61/150 (41%)
man2a2NP_001006777.1 PLN02701 128..>906 CDD:178304 361/818 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 431 1.000 Domainoid score I582
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55954
Inparanoid 1 1.050 765 1.000 Inparanoid score I541
OMA 1 1.010 - - QHG55783
OrthoDB 1 1.010 - - D1101882at2759
OrthoFinder 1 1.000 - - FOG0002281
OrthoInspector 1 1.000 - - otm49416
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2015
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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