DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIa and Man2b1

DIOPT Version :9

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:XP_006255335.1 Gene:Man2b1 / 361378 RGDID:3039 Length:1021 Species:Rattus norvegicus


Alignment Length:975 Identity:255/975 - (26%)
Similarity:422/975 - (43%) Gaps:223/975 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LKVFVVPHSHNDPGWIQTFEEYY------------------QH-DTKHILSNALRHLHDNPEMKF 190
            |.|.::||:|:|.||::|.::||                  || ..::||.:.:..|.::|..:|
  Rat    63 LNVHLLPHTHDDVGWLKTVDQYYYGMDPHLLTFMPIVMSDVQHASVQYILDSVIYSLLNDPTRRF 127

  Fly   191 IWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQ 255
            |:.|:::|:|::.......:..::::|:.|:||||.|||||.|||.:|:..::.|:|.|..:|:.
  Rat   128 IYVEMAFFSRWWKQQTNVTQDAVRNLVRQGRLEFVNGGWVMNDEAATHYGAIVDQMTLGLRFLQD 192

  Fly   256 FM--NVTPTASWAIDPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNK 318
            ..  :..|..:|.|||||||.....:..:.||....:.|..|..|....::.::|.|||.....|
  Rat   193 TFGSDGLPRVAWHIDPFGHSREQASLFAQMGFDGFFLGRIDYQDKFNRKRKLKMEELWRASASLK 257

  Fly   319 GDTA-LFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKV----PPRTISDQNVAAR 378
            ...| |||.::| .:|:       .||..|               |.|    ||......:....
  Rat   258 PPAADLFTGVLP-NNYN-------PPKDLC---------------WDVLCTDPPVVDDPTSPEFN 299

  Fly   379 SDLLVDQW----KKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFN---V 436
            ::.|||.:    ..:.:.||||..::.:|.||:::....|   ..|.::|...:|.|...|   |
  Rat   300 ANKLVDYFLNLASSQKKYYRTNHTVMTMGSDFQYENANMW---FKNMDKLIRLVNEQQQANGSKV 361

  Fly   437 QAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVR 501
            ...:.|...|...:::|    ...:.....|||.|||....:|:||::|||..||.:|:..::::
  Rat   362 HVLYSTPSCYLWELNKA----NLTWTVKEDDFFPYADGPHMFWTGYFSSRPALKRYERLSYNFLQ 422

  Fly   502 AAEMLSA----------WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQE 556
            ....|.|          :.|.|. |.:.|       .:::.||||.:||||:.:||.||.:::..
  Rat   423 VCNQLEALVGPEAKVGPYGSGDS-APLNE-------AMAVLQHHDAVTGTARQNVVNDYAKQLAA 479

  Fly   557 ALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKH--V 619
            ....|::::..::.||    |:|..:|||.. .::.|..|.|..               |:|  |
  Rat   480 GWGPCEVLVSNALARL----SLYKQNFSFCR-EINISICPASQT---------------SEHFRV 524

  Fly   620 VMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIF 684
            :::|  |..|:  ||..|..|......|..:|.:.::|       ..:.........|.::.::|
  Rat   525 IIYN--PVGRK--VDLMVRLPVSEGIFLVKDPNDRRIS-------SNVVMVPSAYSKTYQWELLF 578

  Fly   685 KARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPT 749
            .|.||.:|.:.|.:   :....|...|.||..|                   |::...||     
  Rat   579 PASVPALGFSIYSV---NKMSGHNHQAHNLTAR-------------------PKKSKSRV----- 616

  Fly   750 LAF----------SEQGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDR-----SGAYLFLP-NGP 798
            |..          |:.|||:.|:..:.:..:||...|..|.. |.||.     ||||:|.| :..
  Rat   617 LVIENKYIRATFDSDTGLLRKIENLEQNISLPVRQGFFWYNA-SAGDEESPQASGAYIFRPSHRK 680

  Fly   799 ASPVELGQPVVLVTKGKLESSVSVGLPSVVHQTIMRGGAPEIRNLVD----------IGSLD--- 850
            ..||.....|.|         |...|...|||......:..|| |.:          :|.:.   
  Rat   681 PLPVSHWAQVTL---------VKTNLVQEVHQNFSAWCSQVIR-LYEGQRHLELEWTVGPIPVKD 735

  Fly   851 --NTEIVMRLETHIDSGDIFYTDLNGLQFIKRR-------RLDKL-PLQANYYPIPSGMFIEDAN 905
              ..|::.|..|.:.:...|:||.||.:.:|||       .|::. |:..||||:.:.::|.|.:
  Rat   736 DWGKEVISRFNTPMRTRGQFFTDSNGREILKRRDDFRPTWTLNQTEPVAGNYYPVNTRIYITDGH 800

  Fly   906 TRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLD---NKPVLHIYRLVLEKVNNCV 967
            .:||:||.:..|||||..|.||:|..|||..|||||:.:.:|:   ...|...:.::|..|::  
  Rat   801 MQLTVLTDRSQGGSSLLDGSLELMVHRRLLVDDERGVAEPLLETDTGDKVRGRHLVILSSVSD-- 863

  Fly   968 RPSELHPAGYLTSAAHK--ASQSLLDPLDKFIFAENEWIGAQGQFGGDHP--SAREDLDVSVMRR 1028
                       .:|.|:  |.|.:|.|  :.:.|.          ||..|  |....:..|.:||
  Rat   864 -----------AAARHRLLAEQEVLAP--QVVLAH----------GGSSPYHSQAPKMQFSALRR 905

  Fly  1029  1028
              Rat   906  905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 GH38N_AMII_GMII_SfManIII_like 144..483 CDD:212120 101/370 (27%)
Alpha-mann_mid 478..554 CDD:214875 27/85 (32%)
Glyco_hydro_38C 744..1103 CDD:285047 91/331 (27%)
Man2b1XP_006255335.1 GH38N_AMII_LAM_like 63..351 CDD:212121 86/313 (27%)
Alpha-mann_mid 399..477 CDD:214875 27/85 (32%)
Glyco_hydro_38C 617..1011 CDD:285047 90/325 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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