DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIa and Man2b2

DIOPT Version :10

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_001128443.2 Gene:Man2b2 / 360955 RGDID:1308840 Length:1004 Species:Rattus norvegicus


Alignment Length:911 Identity:248/911 - (27%)
Similarity:388/911 - (42%) Gaps:174/911 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 PLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHILSNALRHLHDNPEMKFIWAEISYFAR 200
            ||.......::.|||||||.|.||:.|.:|..:....::.:..:..|....:.:||..|..:| |
  Rat    18 PLAARPASPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTTVVEELVRGRQRRFIAVEQEFF-R 81

  Fly   201 FYHD--LGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTA 263
            .:.|  ..|.:|.|::.::..|:||||.||.||.|||.:|..:.:||||||..:|.:...:.|..
  Rat    82 LWWDGVASEQQKQQVRQLLDEGRLEFVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQF 146

  Fly   264 SWAIDPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMM 328
            ||.:||||.|.|.|.:...:||...||.|..|.:|..:.:.:.|:|:|...........::||:|
  Rat   147 SWHVDPFGASATTPTLFALAGFNAHLISRIDYDLKDAMQEAQGLQFVWHGSPSLSEQQEIYTHVM 211

  Fly   329 PFYSYDIPHTCGPDPKVCCQFDFKRMGSF---GLSCPWKVPP--------RTISDQNVAARSDLL 382
            ..|||     |.|.     ...|.....|   |::...:.||        ..::..|:...::.|
  Rat   212 DLYSY-----CTPS-----HIPFSNRSGFYWNGVAVFPEPPPDGVYPNMSEPVTVDNIHLYAEAL 266

  Fly   383 VDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQ-AHFNVQAQFGTLQEY 446
            |...|::|..:||..:|.|.|.|   ||.....||..|.:.|.|:||:: |.|.:..|:.||.:|
  Rat   267 VANVKQRAAWFRTPHVLWPWGCD---KQFFNASVQFDNMDPLLEYINNRSAQFGISVQYATLNDY 328

  Fly   447 FDAVHQAERAGQAEFPTL-----SGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEML 506
            |.|:|        :|...     ..||..|:......|:|::|||...|.:.|.....:.|.|.:
  Rat   329 FQALH--------DFNVTWDIRDHHDFLPYSSEPQQAWTGFFTSRSTLKGLARQASALLYAGESM 385

  Fly   507 SAWHSW-------DGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMV 564
            ...:.|       |....::: |:|.|..:|..||||.||||....|...|.:.:...::     
  Rat   386 FTRYMWPHPRGTLDPTWALQQ-LQQLRWAVSEVQHHDAITGTESPKVKNMYMEHLSMGMR----- 444

  Fly   565 MQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWR 629
               .|::|:...::..|              ||||. |:|..         .....::|.|. |:
  Rat   445 ---GVHKLMASIALDRP--------------PGSGT-DTRPV---------GYSASVYNPLA-WK 481

  Fly   630 -EQLVDFYVSSPFVSVTDLANNPVEAQVS-----------------PVWSWHHDTLTKTIHPQGS 676
             ..::...|:.|.|||||....||.||:.                 |..|:.|..:.:|...|..
  Rat   482 ITTIITLTVAFPSVSVTDELGRPVSAQIQNSTKDPSAYDLLILTTIPGLSYRHYKVRRTRGDQAG 546

  Fly   677 TTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREIS 741
            |       :..|.|   ....|..|......||....||       :|:                
  Rat   547 T-------RELVTP---RANTLKFSRKLRNQTSQEGKLL-------VPV---------------- 578

  Fly   742 LRVGNGPTLAFSEQ-GLLKSIQLTQDSPHVPVHFKFLKYGVRSHGD-----RSGAYLFLPNGPAS 800
              :.:..||.|.:. .:|.|||..|.:..|.:..:||:|  |::||     .|..|||..|..|.
  Rat   579 --MNDCYTLLFDQDTNMLHSIQDRQSNRTVHMTQEFLEY--RANGDVKQGPISDNYLFASNDTAE 639

  Fly   801 P--VELGQPVVL--------------VTKGKLESSVSVGL----PSVVHQTIMRGGAPEIRNLVD 845
            |  ..:|..:|:              :|......|:...|    ||:..:.:.|    .|.....
  Rat   640 PSWEAVGMEMVVGTLATDVRQYFYRNITDQGYIYSIHTRLAHVHPSLAGELLCR----RIEQQYQ 700

  Fly   846 IGSLD-NTEIVMRLETHIDSGDIFYTDLNGLQFIKR--RRLDKLPLQANYYPIPSGMFIEDANTR 907
            :|.|| |.|.::|..:.::|..:.|:|.||.|..:|  :.....|:..||||:....||||..:|
  Rat   701 VGPLDLNREAILRTSSDLNSQQVLYSDNNGYQMQRRPYKAFKSNPIPRNYYPMVQSAFIEDDKSR 765

  Fly   908 LTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGV-LDNKPVLH-IYRLVL--EKVNNCVR 968
            |.||..:|.|.||..:|::|:|..|||.::....|...: |::..|:| :..|:|  :.....:|
  Rat   766 LVLLAERPHGVSSQENGQVEVMLHRRLWNNLVWDLNYNLTLNDTSVVHPVLWLLLGPKSTTTALR 830

  Fly   969 P 969
            |
  Rat   831 P 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 PLN02701 105..990 CDD:178304 248/911 (27%)
Glyc_hyd_38C_2 1020..1108 CDD:408054
Man2b2NP_001128443.2 PLN02701 27..792 CDD:178304 236/861 (27%)
GH38N_AMII_Epman_like 27..352 CDD:212122 108/346 (31%)
Blue background indicates that the domain is not in the aligned region.

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