DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-IIa and aman-2

DIOPT Version :9

Sequence 1:NP_001262413.1 Gene:alpha-Man-IIa / 41126 FlyBaseID:FBgn0011740 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_505995.2 Gene:aman-2 / 179632 WormBaseID:WBGene00010284 Length:1145 Species:Caenorhabditis elegans


Alignment Length:1181 Identity:431/1181 - (36%)
Similarity:657/1181 - (55%) Gaps:165/1181 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRRFALVICSGCLLVFLSLYIILNFAAPAATQIKQPNY-ENIENKLHELENGLQEHGEEMRNL-- 66
            :|.|.:::|.|..|. :|||:.......|....|:..| :::..|:..||:..:|:|..:..|  
 Worm     3 KRNFYIILCLGVFLT-VSLYLYNGIETGAEALTKRQRYVDDLRRKIGNLEHVAEENGRTIDRLEQ 66

  Fly    67 ---RARLAETSNRDD--------------------PIR---------PPLKVARSPRPGQCQDVV 99
               ||:..::.:.|:                    |:|         ..:|....|.|.. :||.
 Worm    67 EVQRAKAEKSVDFDEEKEKTEEKEVEKEEKEVAPVPVRGNRGEMAHIHQVKQHIKPTPSM-KDVC 130

  Fly   100 QDVPNV-----DVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGW 159
            ....||     |:|||:|||...|::.|||||||||.|:||..|..:..:|:|.|:||||.||||
 Worm   131 GIRENVSIAHSDLQMLDLYDTWKFENPDGGVWKQGWKIEYDAEKVKSLPRLEVIVIPHSHCDPGW 195

  Fly   160 IQTFEEYYQHDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEF 224
            |.||||||...|::||....:||.:..||:||:||||:|..::.|..:..|.::|..::.|:.|.
 Worm   196 IMTFEEYYNRQTRNILDGMAKHLAEKDEMRFIYAEISFFETWWRDQADEIKKKVKGYLEAGKFEI 260

  Fly   225 VTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFM--NVTPTASWAIDPFGHSPTMPYILQKSGFKN 287
            |||||||.||||:|:.:::.:|.||..|::..:  :..|.:.|:|||||.||:||::|..:...|
 Worm   261 VTGGWVMTDEANAHYHSMITELFEGHEWIQNHLGKSAIPQSHWSIDPFGLSPSMPHLLTSANITN 325

  Fly   288 MLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFK 352
            .:|||.|||||:|||.::.|||.|||::.:.|...|.:|:||||||||||||||:|.|||||||:
 Worm   326 AVIQRVHYSVKRELALKKNLEFYWRQLFGSTGHPDLRSHIMPFYSYDIPHTCGPEPSVCCQFDFR 390

  Fly   353 RMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQ 417
            ||...|.||.|.:||:.|:|.|||.|::::.||::||::|::.||:..|||||||:..:.||:.|
 Worm   391 RMPEGGKSCDWGIPPQKINDDNVAHRAEMIYDQYRKKSQLFKNNVIFQPLGDDFRYDIDFEWNSQ 455

  Fly   418 RVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGY 482
            ..||::|||::||::.:||.||||||.:||..:..|..|...:.||.||||||||||.|:|||||
 Worm   456 YENYKKLFEYMNSKSEWNVHAQFGTLSDYFKKLDTAISASGEQLPTFSGDFFTYADRDDHYWSGY 520

  Fly   483 YTSRPYHKRMDRVLMHYVRAAEM--LSAWHSWDGM--ARIEERLEQARRELSLFQHHDGITGTAK 543
            :||||::|::||||.||:|:||:  ..|....:||  |:|.|:|..|||.|||||||||:|||||
 Worm   521 FTSRPFYKQLDRVLQHYLRSAEIAFTLANIEEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAK 585

  Fly   544 THVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTII 608
            .|||:||.|:|.:||.||:.::.:::..||...|.       :...:|:.|              
 Worm   586 DHVVLDYGQKMIDALNACEDILSEALVVLLGIDST-------NKMQMDEHR-------------- 629

  Fly   609 LGEDILPSK-------HVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPV-EAQVSPVWSWHHD 665
            :.|::||.|       :||:.|||...|.:.:...|.|....|.  |:.|: :.|||||.::..:
 Worm   630 VNENLLPEKRVYKIGQNVVLFNTLSRNRNEPICIQVDSLDAGVE--ADPPIKKQQVSPVIAYDEE 692

  Fly   666 TLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPE 730
            ..|..:    ....:.:.|...:.||...::.|.      ::|:.:...::..|........:..
 Worm   693 KKTLVV----KNGIFELCFMLSLGPMESVSFRLV------KNTTTSKVEIITNNAAEFKETSFKS 747

  Fly   731 DVKFGDPREISLRVGNGPTLA--FSEQGLLK-SIQLTQDSPHVPVHFKFLKYGVR------SHGD 786
            ....||     ..|.|....|  ..|.|::| :..|..|.| :.::..|:.||.|      ::|:
 Worm   748 SSTSGD-----FTVKNDKVEAEFDGENGMIKRATSLVDDKP-IDLNSHFIHYGARKSKRKFANGN 806

  Fly   787 R---SGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPS----VVHQTIMRGGAP--EIRN 842
            .   :|||||||:|.|..::......::.||::...| ...|:    ::....:..|.|  ::.|
 Worm   807 EDNPAGAYLFLPDGEARELKKQSSDWILVKGEVVQKV-FATPNNDLKILQTYTLYQGLPWIDLDN 870

  Fly   843 LVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTR 907
            .||:.|.:|.|:.:|..:.::|||.|:|||||:|.|||||..|||.|||:||:.:|::|||..||
 Worm   871 EVDVRSKENFELALRFSSSVNSGDEFFTDLNGMQMIKRRRQTKLPTQANFYPMSAGVYIEDDTTR 935

  Fly   908 LTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSEL 972
            :::.:.|.||.|||:||::|||.||||:|||.|||.|||.|||..:..:|:|:|.:::.....:.
 Worm   936 MSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQGVRDNKRTVAHFRIVIEPMSSSSGNKKE 1000

  Fly   973 HPAGYLTSAAHKASQSLLDPLDKFIFAENEWIGAQGQFGGDHPSARE----------DLDVSVMR 1027
            ...|:.:...|.|:.||..||.|.|             |...|.:..          ||.:...|
 Worm  1001 ERVGFHSHVGHLATWSLHYPLVKMI-------------GDATPKSISSKNVEQELNCDLHLVTFR 1052

  Fly  1028 RLT---------KSSAKTQRVGYVLHR-------------TNLMQCGTPEEHTQKLDVCHLLPNV 1070
            .|.         :|:|..::...|:||             |:.:..|.      :::...|:..:
 Worm  1053 TLASPTTYEANERSTAAEKKAAMVMHRVVPDCRSRLTLPDTSCLATGL------EIEPLKLISTL 1111

  Fly  1071 ARCERTTLTFL 1081
            ...::|:||.|
 Worm  1112 KSAKKTSLTNL 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIaNP_001262413.1 GH38N_AMII_GMII_SfManIII_like 144..483 CDD:212120 175/340 (51%)
Alpha-mann_mid 478..554 CDD:214875 49/79 (62%)
Glyco_hydro_38C 744..1103 CDD:285047 122/388 (31%)
aman-2NP_505995.2 PLN02701 142..1124 CDD:178304 402/1040 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159883
Domainoid 1 1.000 377 1.000 Domainoid score I453
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55954
Inparanoid 1 1.050 704 1.000 Inparanoid score I340
Isobase 1 0.950 - 0 Normalized mean entropy S4542
OMA 1 1.010 - - QHG55783
OrthoDB 1 1.010 - - D1101882at2759
OrthoFinder 1 1.000 - - FOG0002281
OrthoInspector 1 1.000 - - oto20581
orthoMCL 1 0.900 - - OOG6_102728
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3970
SonicParanoid 1 1.000 - - X2015
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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