DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task7 and Kcnc4

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_038959057.1 Gene:Kcnc4 / 684516 RGDID:1589169 Length:663 Species:Rattus norvegicus


Alignment Length:87 Identity:21/87 - (24%)
Similarity:36/87 - (41%) Gaps:33/87 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LVMFQSIGERLNKFASVII---RRAKRASGARCTDATEM-NLMLATGMLSSIIITTGAAVFSRYE 183
            |::|.::|..:  ||::|.   |...|.|..|..|.|:. |:.:                     
  Rat   385 LIIFLALGVLI--FATMIYYAERIGARPSDPRGNDHTDFKNIPI--------------------- 426

  Fly   184 GWSYFDSFYYCFVTLTTIGFGD 205
                  .|::..||:||:|:||
  Rat   427 ------GFWWAVVTMTTLGYGD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 3/9 (33%)
Ion_trans_2 166..244 CDD:462301 8/40 (20%)
Kcnc4XP_038959057.1 Potassium_chann 1..29 CDD:431870
BTB_KCNC2_4 35..159 CDD:349722
Ion_trans 226..484 CDD:459842 21/87 (24%)
Blue background indicates that the domain is not in the aligned region.

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