DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task7 and kcnc1a

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_005168950.1 Gene:kcnc1a / 565419 ZFINID:ZDB-GENE-061220-10 Length:609 Species:Danio rerio


Alignment Length:164 Identity:34/164 - (20%)
Similarity:60/164 - (36%) Gaps:46/164 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LSLVVCTFTYLLIGAAVFDSLESPTEAKRWEFLQTVKNNFVRKYNVTDEDFRVMEIVIIENKPHK 74
            |.|::    :|.:|..:|.::                ..:..:......|.|..|....:|.|. 
Zfish   344 LLLII----FLALGVLIFATM----------------IYYAERIGANPNDPRASEHTHFKNIPI- 387

  Fly    75 AGPQWKFAGAFYFSTVVLAMIGYGHSTPVTIPGK---AFC--MGYAMVGIPLGLV-----MFQSI 129
                     .|:::.|.:..:|||...|.|..|.   |.|  .|...:.:|:.::     |:.|:
Zfish   388 ---------GFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSL 443

  Fly   130 G---ERLNKFASVIIRRAKRASGAR-CTDATEMN 159
            .   ::|.|..:..|.||.:...|. |..|  ||
Zfish   444 AMAKQKLPKKKNKHIPRAPQLGSANYCKSA--MN 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 14/71 (20%)
Ion_trans_2 166..244 CDD:462301
kcnc1aXP_005168950.1 BTB_KCNC1_3 6..122 CDD:349721
Ion_trans 189..445 CDD:459842 24/130 (18%)
Blue background indicates that the domain is not in the aligned region.

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