DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Task7 and kcnf1a

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001076280.1 Gene:kcnf1a / 557280 ZFINID:ZDB-GENE-041001-217 Length:494 Species:Danio rerio


Alignment Length:342 Identity:62/342 - (18%)
Similarity:128/342 - (37%) Gaps:85/342 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVVCTFTYLLIGAAVF---------------DSLESPTEAKRWEFLQTVKNNFVRKYNVTDEDFR 61
            :.|.:|.::|:.:.|.               ...|.||       |:.::...:..:.|.    .
Zfish   187 IAVVSFVFILLSSVVMCVGTIPELQVQDDEGHLTEHPT-------LEAIETACIIWFTVE----Y 240

  Fly    62 VMEIVIIENKPHKAGPQWKFAGAFYFSTVVLAMIGYGHSTPVTIPGKAFCMGYAMVGIPLGLVMF 126
            |:.:....:|.|           |.||  .|.:|.:....|..:......:|.||:.:.......
Zfish   241 VLRLASSSSKLH-----------FVFS--FLNIIDFLAIMPFYVVLILTHLGTAMMELANVQQAV 292

  Fly   127 QSIGERLNKFASVIIRRAKRASG------ARCTDATEMNLMLATGMLSSIIITTGAAVFSRYEGW 185
            |::  |:.:.|. |.:.|:.:||      |..:...|:.|:|       :.::.|..:||.. |:
Zfish   293 QAL--RIMRIAR-IFKLARHSSGLQTLTFALKSSLKELGLLL-------MYMSVGIFLFSAL-GY 346

  Fly   186 ------------SYFDSFYYCFVTLTTIGFGDYVALQN----DQALTNKPGYVALSLVF--ILFG 232
                        |...||::..:|:||:|:||......    :.|::...|.:|::|..  |:..
Zfish   347 TMEQSHPETMFTSIPQSFWWAIITMTTVGYGDIYPKTTLGRCNAAVSFLCGVIAIALPIHPIINN 411

  Fly   233 LAVVAASINLL------VLRFMTMQAEDAKRDEQDAQNLAGNAQPVTFDDESTYNMHGK-----L 286
            ..:|.:...:|      .:..|.::|.:..::..:|:..|.:....:..|.:..:....     |
Zfish   412 FVIVYSKQRVLETAAKHEIELMALRAREEAQECPEAERRAASVDSSSMWDSAAVSASQSDSFIPL 476

  Fly   287 LENNYTTENDETASLCS 303
            |....|...::.|..|:
Zfish   477 LGETATVSKNQRAQKCN 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 10/58 (17%)
Ion_trans_2 166..244 CDD:462301 20/101 (20%)
kcnf1aNP_001076280.1 BTB_POZ_Kv5_KCNF1 21..136 CDD:349690
Ion_trans 184..420 CDD:459842 51/267 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.