DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task7 and Kcnf1

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001162575.1 Gene:Kcnf1 / 298908 RGDID:631414 Length:505 Species:Rattus norvegicus


Alignment Length:290 Identity:62/290 - (21%)
Similarity:111/290 - (38%) Gaps:88/290 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SLVVC--TFTYLLIGAAVFDSLESPTEAKRWEFLQTVKNN----FVRKYNVTDEDFRVMEIVIIE 69
            |:|:|  |...|.:..:..:.:|.||       |:.|:..    |..:|        ::.:....
  Rat   208 SVVMCMGTIPELQVVDSEGNRVEHPT-------LENVETACIGWFTLEY--------LLRLFSSP 257

  Fly    70 NKPHKAGPQWKFAGAFYFSTVVLAMIGYGHSTPVTIPGKAFCMGYAMVGIPLGLVMFQSIGERLN 134
            ||.|       ||.:|.....|||::.:..|..:|      .:|..|:.:.......|::  |:.
  Rat   258 NKLH-------FALSFMNIVDVLAILPFYVSLTLT------HLGARMMELTNVQQAVQAL--RIM 307

  Fly   135 KFASVIIRRAKRASG------ARCTDATEMNLMLATGMLSSIIITTGAAVFSRYEGW-------- 185
            :.|. |.:.|:.:||      |......|:.|:|       :.:..|..|||.. |:        
  Rat   308 RIAR-IFKLARHSSGLQTLTYALKRSFKELGLLL-------MYLAVGIFVFSAL-GYTMEQSHPE 363

  Fly   186 ----SYFDSFYYCFVTLTTIGFGDYVALQNDQALTNKPGYVALSL------VFILFGLAVVAASI 240
                |...||::..:|:||:|:||.              |...:|      :..|.|:..:|..|
  Rat   364 TLFKSIPQSFWWAIITMTTVGYGDI--------------YPKTTLGKLNAAISFLCGVIAIALPI 414

  Fly   241 NLLV---LRFMTMQ--AEDAKRDEQDAQNL 265
            :.::   :|:...|  .|.|.:.|.:...|
  Rat   415 HPIINNFVRYYNKQRVLETAAKHELELMEL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 11/58 (19%)
Ion_trans_2 166..244 CDD:462301 20/95 (21%)
Kcnf1NP_001162575.1 BTB_POZ_Kv5_KCNF1 35..150 CDD:349690
Ion_trans 193..429 CDD:459842 57/273 (21%)
Blue background indicates that the domain is not in the aligned region.

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