DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task7 and Kcna4

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_037103.2 Gene:Kcna4 / 25469 RGDID:2952 Length:654 Species:Rattus norvegicus


Alignment Length:144 Identity:35/144 - (24%)
Similarity:62/144 - (43%) Gaps:28/144 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 IIRRAKRASGARCTDATEMNLMLATGML-----SSIIITTGAAVFSRY-EGWSYF----DSFYYC 194
            |.:.::.:.|.:....|....|...|:|     ..:|:.:.|..|:.. |..::|    |:|::.
  Rat   455 IFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWA 519

  Fly   195 FVTLTTIGFGDYVALQNDQALTNKP----GYVALSLVFILFGLAVVAASINLLVLRFMTMQAEDA 255
            .||:||:|:||.           ||    |.:..||..|. |:..:|..:.::|..|......:.
  Rat   520 VVTMTTVGYGDM-----------KPITVGGKIVGSLCAIA-GVLTIALPVPVIVSNFNYFYHRET 572

  Fly   256 KRDEQDAQNLAGNA 269
            :.:||  ..|..||
  Rat   573 ENEEQ--TQLTQNA 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301
Ion_trans_2 166..244 CDD:462301 23/91 (25%)
Kcna4NP_037103.2 K_channel_TID 1..>37 CDD:429748
BTB_POZ 177..304 CDD:453885
Ion_trans 307..571 CDD:459842 30/127 (24%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 463..476 2/12 (17%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 525..530 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654
PDZ-binding. /evidence=ECO:0000269|PubMed:7477295 652..654
Blue background indicates that the domain is not in the aligned region.

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