DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Task7 and Kcnc2

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_631963.1 Gene:Kcnc2 / 246153 RGDID:628829 Length:638 Species:Rattus norvegicus


Alignment Length:166 Identity:36/166 - (21%)
Similarity:60/166 - (36%) Gaps:46/166 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 FYYCFVTLTTIGFGDYVALQNDQALTNKPGYVALSLVFILFGLAVVAASINLLVLRF-------M 248
            |::..||:||:|:||    ...|..:.    :.:..:..|.|:..:|..:.::|..|       |
  Rat   428 FWWAVVTMTTLGYGD----MYPQTWSG----MLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAM 484

  Fly   249 TMQAEDAKRDEQDAQNLAGNAQPVTFDDESTYNMHGKLLENNYTTENDETASLCSCTCMG-GTRC 312
            ..|....||.:        :..|.......|:..         |..|....|..|.||:| ..|.
  Rat   485 AKQKLPRKRKK--------HIPPAPLASSPTFCK---------TELNMACNSTQSDTCLGKENRL 532

  Fly   313 LNHEQFV---------DPDFQPTDIIESTLCLKRAS 339
            |.|.:.|         :|...|.:    .|.::|:|
  Rat   533 LEHNRSVLSGDDSTGSEPPLSPPE----RLPIRRSS 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301
Ion_trans_2 166..244 CDD:462301 12/52 (23%)
Kcnc2NP_631963.1 BTB_KCNC2_4 7..166 CDD:349722
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..75
Ion_trans 228..484 CDD:459842 14/63 (22%)
Selectivity filter. /evidence=ECO:0000250 437..442 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..572 6/31 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.