DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Task7 and Kcnb2

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_446452.2 Gene:Kcnb2 / 117105 RGDID:621349 Length:907 Species:Rattus norvegicus


Alignment Length:281 Identity:59/281 - (20%)
Similarity:99/281 - (35%) Gaps:103/281 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRQNVRTLSLVVCTFTYLLIGAAVFDSLESPTEAKRWEFLQ--------------------TVKN 47
            |..:|..:.:...|..|||      ..|.||   .:|:|.:                    |..|
  Rat   232 KLAHVEAVCIAWFTMEYLL------RFLSSP---NKWKFFKGPLNVIDLLAILPYYVTIFLTESN 287

  Fly    48 NFVRKY-NV--TDEDFRVMEIVIIENKPHKAGPQWKFAGAFYFSTVVLAMIGYGHSTPVTIPGKA 109
            ..|.:: ||  ..:.||:|.|:.|                     :.||.    |||.:...|..
  Rat   288 KSVLQFQNVRRVVQIFRIMRILRI---------------------LKLAR----HSTGLQSLGFT 327

  Fly   110 FCMGYAMVGIPLGLVMFQSIGERLNKFASVIIRRAKRASGARCTDATEMNLMLATGMLSSIIITT 174
            ....|..:|:   |::|.::|..:  |:|::....|.      .|||:...:.|           
  Rat   328 LRRSYNELGL---LILFLAMGIMI--FSSLVFFAEKD------EDATKFTSIPA----------- 370

  Fly   175 GAAVFSRYEGWSYFDSFYYCFVTLTTIGFGDYVALQNDQALTNKPGYVALSLVFILFGLAVVAAS 239
                           ||::..:|:||:|:||..    .:.|..|    .:..:..:.|:.|:|..
  Rat   371 ---------------SFWWATITMTTVGYGDIY----PKTLLGK----IVGGLCCIAGVLVIALP 412

  Fly   240 INLLVLRFMTMQAEDAKRDEQ 260
            |.::|..|.....|. ||.|:
  Rat   413 IPIIVNNFSEFYKEQ-KRQEK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 11/58 (19%)
Ion_trans_2 166..244 CDD:462301 14/77 (18%)
Kcnb2NP_446452.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 56/275 (20%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386 2/4 (50%)
Kv2channel 471..755 CDD:397541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 550..570
FFAT. /evidence=ECO:0000250|UniProtKB:Q92953 605..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..860
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 884..907
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.