DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task7 and Kcnd1

DIOPT Version :10

Sequence 1:NP_649891.1 Gene:Task7 / 41125 FlyBaseID:FBgn0037690 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001099218.1 Gene:Kcnd1 / 116695 RGDID:621364 Length:650 Species:Rattus norvegicus


Alignment Length:356 Identity:72/356 - (20%)
Similarity:118/356 - (33%) Gaps:140/356 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TLSLVVCTFTYLL-IGAAVFDSLESPTEAKRWEFLQTV-------------------KNNFVRKY 53
            |..:::.|..||| :.||          ..|..||::|                   ||:.|...
  Rat   236 TACVLIFTGEYLLRLFAA----------PSRCRFLRSVMSLIDVVAILPYYIGLFVPKNDDVSGA 290

  Fly    54 NVTDEDFRVMEIVIIENKPHKAGPQWKFAGAFYFSTVVLAMIGYGHSTPVTIPGKAFCMGYAMVG 118
            .||...|||..  |.:...|..|               |.::||      |:...|..:|:.:..
  Rat   291 FVTLRVFRVFR--IFKFSRHSQG---------------LRILGY------TLKSCASELGFLLFS 332

  Fly   119 IPLGLVMFQSIGERLNKFASVIIRRAKRASGARCTDATEMNLMLATGMLSSIIITTGAAVFSRYE 183
            :.:.:::          ||:|:....|..|....|                              
  Rat   333 LTMAIII----------FATVMFYAEKGTSKTNFT------------------------------ 357

  Fly   184 GWSYFDSFYYCFVTLTTIGFGDYVALQNDQALTNKPGYVA---LSLVFILFGLAVVAASINLLVL 245
              |...:|:|..||:||:|:||.|           |..:|   ...:..|.|:.|:|..:.::|.
  Rat   358 --SIPAAFWYTIVTMTTLGYGDMV-----------PSTIAGKIFGSICSLSGVLVIALPVPVIVS 409

  Fly   246 RFMTMQAEDAKRDEQDAQ--------NLAGNAQPVTFDDESTYNMHGKLLENNYTTENDETASLC 302
            .|..:..::.:.|::.||        .||.:.....|   ..|..:|.|.::.    :.|...||
  Rat   410 NFSRIYHQNQRADKRRAQQKVRLARIRLAKSGTTNAF---LQYKQNGGLEDSG----SGEGQMLC 467

  Fly   303 SCT-------------CMGGTRCLNHEQFVD 320
            ..:             |:..|.|  || |.|
  Rat   468 VRSRSAFEQQHHHLLHCLEKTTC--HE-FTD 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task7NP_649891.1 Ion_trans_2 <74..133 CDD:462301 7/58 (12%)
Ion_trans_2 166..244 CDD:462301 17/80 (21%)
Kcnd1NP_001099218.1 BTB_POZ 6..143 CDD:453885
Ion_trans 185..417 CDD:459842 53/266 (20%)
DUF3399 470..550 CDD:463381 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.

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