DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and TUBA1C

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001290043.1 Gene:TUBA1C / 84790 HGNCID:20768 Length:519 Species:Homo sapiens


Alignment Length:454 Identity:183/454 - (40%)
Similarity:269/454 - (59%) Gaps:21/454 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVHIQAGQCGNQIGGKFWEVISDEHCIDATG------TYYGDSDLQLERINVYYNEATGAKYV 60
            ||.:.|..||.|.|||...||:...||.|...|      |..|..|    ..|.:::|....|:|
Human    72 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDD----SFNTFFSETGAGKHV 132

  Fly    61 PRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 125
            |||:.|||||..:|.||:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.|||.:||.::
Human   133 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 197

  Fly   126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190
            .|..||||.:.||.|||||||..:||:.::..:|..:....||:.|:|:||..||||||:.|:.|
Human   198 QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 262

  Fly   191 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255
            ..:|::|..:.:||||:||||.|.|.:..|||.:||.|:|..:|.:|..|||.|.||.||.:...
Human   263 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQT 327

  Fly   256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGR 320
            |:||:||:||.:..:||:.|.....:..|||.|:|...|:..|.|..||||||:|:....::||.
Human   328 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 392

  Fly   321 MSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPP--------RGLKMSATFIGNSTAIQEL 377
            :..|:|:..:..|:.|.:..||:|.|...|..:...||        ..::.:...:.|:||:.|.
Human   393 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEA 457

  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEE 441
            :.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:|::....:||.|   ||.||
Human   458 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGE---DEGEE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 176/441 (40%)
TUBA1CNP_001290043.1 PTZ00335 72..518 CDD:185562 181/452 (40%)
alpha_tubulin 72..505 CDD:276955 176/436 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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