DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tubb4b

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_012825219.1 Gene:tubb4b / 779904 XenbaseID:XB-GENE-969447 Length:474 Species:Xenopus tropicalis


Alignment Length:470 Identity:422/470 - (89%)
Similarity:433/470 - (92%) Gaps:29/470 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEAT---------- 55
            ||||||:||||||||||.||||||||||.||.||||:||||||||||||||||||          
 Frog     1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGEWECRFCSV 65

  Fly    56 -------------------GAKYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNW 101
                               |.||||||:|||||||||||||||.|||||||||||||||||||||
 Frog    66 GGCWSSRIPGMPYILLPFAGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 130

  Fly   102 AKGHYTEGAELVDSVLDVVRKESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 166
            ||||||||||||||||||||||:|.||||||||||||||||||||||||||||||||||||||||
 Frog   131 AKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT 195

  Fly   167 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   196 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 260

  Fly   232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA 296
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   261 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA 325

  Fly   297 KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRGL 361
            |||||||||||||||||||:||||||||||||||||:||||||:||||||||.||||||||||||
 Frog   326 KNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGL 390

  Fly   362 KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
            |||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||
 Frog   391 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 455

  Fly   427 EATADEEGEFDEDEE 441
            :|||:|||||:|.||
 Frog   456 DATAEEEGEFEEGEE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 412/457 (90%)
tubb4bXP_012825219.1 PLN00220 1..459 CDD:215107 412/457 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5717
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.030

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