DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub85D and Tube1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_082282.1 Gene:Tube1 / 71924 MGIID:1919174 Length:475 Species:Mus musculus


Alignment Length:458 Identity:145/458 - (31%)
Similarity:237/458 - (51%) Gaps:40/458 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCI--------DATGTYYGDSDLQLERINVYYNEATGA 57
            |.:.|.:|.||||||||..||::...||..        ||..:::.:.|.:........::...:
Mouse     1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRIS 65

  Fly    58 KYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 122
            ....||:|:|:|.|.::.:..|....:|.....:...||:|||||.||...|....:.:|:.:||
Mouse    66 SLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRK 130

  Fly   123 ESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
            .:|.|||||.|.:.||:|||||||:||.|:..:.:|:|:......:|.||.: .|.:..|||:.|
Mouse   131 SAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSE-DDVITSPYNSML 194

  Fly   188 SVHQLVENTDETYCIDNEALYDI---------------CFRTLKLTTPTYG-----------DLN 226
            ::.:|.|:.|....|||::|:||               ..:...|.|...|           .:|
Mouse   195 AMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHHKKPFDAMN 259

  Fly   227 HLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
            ::|:..:..:|:..||.|.||.||.::::|:||||:||:.:....||.:..........:.::..
Mouse   260 NIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPRRLDQMFS 324

  Fly   292 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQN-KNSSFFVEWIPNNCKTAVCD 355
            ..|...:.:...||||..||..|.|.||.:   ::.:...||:. |.:..||.|.....||::|.
Mouse   325 DAFSKDHQLIQADPRHSLYLACALIVRGNV---QISDLRRNIERLKPALQFVSWNQEGWKTSLCS 386

  Fly   356 IPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLV 419
            :||.|...|...:.|:|.::..|..:.|:||.::::||.||.|.. :||:|..||||.|:::.|:
Mouse   387 VPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSLSALI 451

  Fly   420 SEY 422
            .||
Mouse   452 QEY 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 145/458 (32%)
Tube1NP_082282.1 epsilon_tubulin 2..457 CDD:276959 144/457 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.