DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tubb1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001313351.1 Gene:tubb1 / 558552 ZFINID:ZDB-GENE-110408-5 Length:466 Species:Danio rerio


Alignment Length:443 Identity:368/443 - (83%)
Similarity:401/443 - (90%) Gaps:3/443 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAIL 65
            ||||||:|.||||||||.||||||||||.|:..|.|.||.||||||:|||:|||.|.||||||:|
Zfish     1 MREIVHLQIGQCGNQIGSKFWEVISDEHGINRVGAYEGDMDLQLERVNVYFNEAHGGKYVPRALL 65

  Fly    66 VDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCL 130
            ||||||||||||....||:||||||:.|.|||||||||||||||||||:.|:|.||.|:|.|||:
Zfish    66 VDLEPGTMDSVRGSQIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRVRNEAESCDCM 130

  Fly   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVEN 195
            ||||..||||||||||||||:|:||||||||||||:|||:||||||||||||||||||:|||:||
Zfish   131 QGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNATLSIHQLIEN 195

  Fly   196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            |||||||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||
Zfish   196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKE 325
            ||||||||||||||:||||||||||||||||||||.:|||.|||||.|||||||.|||||||.||
Zfish   261 PRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDPRNMMTACDPRRGRYLTVAGIFRGRMSTKE 325

  Fly   326 VDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFR 390
            ||||||.||.|||::||:|||:|.|.||||||||||||::|||||:|||||:|||:.|||..|||
Zfish   326 VDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPPRGLKMASTFIGNNTAIQEVFKRIGEQFALMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD---EEGEFDEDE 440
            |||||||||||||||:||:|||||:|||||||||||:||||   ||.|..|:|
Zfish   391 RKAFLHWYTGEGMDELEFSEAESNLNDLVSEYQQYQDATADMDYEEEEVMEEE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 360/428 (84%)
tubb1NP_001313351.1 PTZ00010 1..433 CDD:240228 363/431 (84%)
beta_tubulin 2..426 CDD:276956 356/423 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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