DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tuba5

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001015934.1 Gene:tuba5 / 548688 XenbaseID:XB-GENE-5788469 Length:449 Species:Xenopus tropicalis


Alignment Length:456 Identity:182/456 - (39%)
Similarity:268/456 - (58%) Gaps:23/456 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATG------TYYGDSDLQLERINVYYNEATGAKY 59
            |||.:.:..||.|.|||...||:...||.|...|      |..|..|    ..|.:::|....|:
 Frog     1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDD----SFNTFFSETGAGKH 61

  Fly    60 VPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 124
            ||||:.||||...:|.||:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.||:.|||.:
 Frog    62 VPRAVFVDLESAVIDEVRNGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLERVRKLA 126

  Fly   125 EGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 189
            :.|..||||.:.||.|||||||..:||:.::..:|..:....|::.|:|:||..||||||:.|:.
 Frog   127 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191

  Fly   190 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 254
            |..:|::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:..
 Frog   192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

  Fly   255 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRG 319
            .|:||:||:||.:..::|:.|.....:..|:|.|:|...|:..|.|..||||||:|:....::||
 Frog   257 TNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITNACFEPSNQMVKCDPRHGKYMACCMLYRG 321

  Fly   320 RMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRG--------LKMSATFIGNSTAIQE 376
            .:..|:|:..:..|:.|.|..||:|.|...|..:...||..        ::.:...:.|:|||.|
 Frog   322 DVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAE 386

  Fly   377 LFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADE-EGEFDEDE 440
            .:.|:..:|..|:.::||:|||.||||:|.||:||.   .||.:..:.|:|...|. ||| ||.|
 Frog   387 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGTDSIEGE-DEGE 447

  Fly   441 E 441
            |
 Frog   448 E 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 174/442 (39%)
tuba5NP_001015934.1 PTZ00335 1..448 CDD:185562 180/454 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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