DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and TUBD1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_057345.2 Gene:TUBD1 / 51174 HGNCID:16811 Length:453 Species:Homo sapiens


Alignment Length:474 Identity:116/474 - (24%)
Similarity:209/474 - (44%) Gaps:81/474 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVHIQAGQCGNQIGGKFWE-VISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILVD 67
            ||.:|.||||||||.:.:: ::||.|......:...:...|......:::|......:.||:|||
Human     3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIARAVLVD 67

  Fly    68 LEPGTMDSVRSGA--FGQIFRPDNFVFGQ-------SGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
            :||..::.:.|.|  .||      :.:||       .|:|||||.|:...|....:|:::::|||
Human    68 MEPKVINQMLSKAAQSGQ------WKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNIIRKE 126

  Fly   124 SEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI-MNTFSVVPSPKVSDTVVEPYNATL 187
            .|.||...||.:..|:.||||||:|..:...:.::|.:.: ||  .::......:.:|:.||:.|
Human   127 VEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMN--QIIWPYGTGEVIVQNYNSIL 189

  Fly   188 SVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD--- 249
            ::..|..::|.....:|:|::.||.:.:.:...::.|:|.:::..:..|     |....:|:   
Human   190 TLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV-----FQPTYSAESSF 249

  Fly   250 ------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----VPELTQQMFDAKNMMAACD 304
                  |..|..::||.|..........|..|..|..|...|    :..|.|.:.....|....|
Human   250 HYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLRQMLISNAKMEEGID 314

  Fly   305 PRH----------------------GRYLTVAAIFRGRMSMKEVDEQMLNIQN-KNSSFFVEWI- 345
             ||                      ...:....|.||:      |.|..:::. |:.:.:..|: 
Human   315 -RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGK------DVQSADVEGFKDPALYTSWLK 372

  Fly   346 PNNC----KTAVCDIPPRGL---KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGM 403
            |.|.    ||      .|..   :.||..:.||..:.:....:..:...||..||::|.||..|:
Human   373 PVNAFNVWKT------QRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGI 431

  Fly   404 DEMEFTEAESNMNDLVSEY 422
            :|.:|.::.:::..:|:.|
Human   432 EEEDFLDSFTSLEQVVASY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 116/474 (24%)
TUBD1NP_057345.2 delta_zeta_tubulin-like 2..452 CDD:276958 116/474 (24%)
Tubulin 2..213 CDD:278518 65/217 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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