DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tubd1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001006747.1 Gene:tubd1 / 448419 XenbaseID:XB-GENE-488049 Length:451 Species:Xenopus tropicalis


Alignment Length:491 Identity:124/491 - (25%)
Similarity:210/491 - (42%) Gaps:117/491 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVHIQAGQCGNQIGGKFWEVI-SDEHCIDATGTYYGDSDLQLERINVYY---------NEATGAK 58
            :|.:|.||||||:|.:|:::: ||.|......|         :|.|.||         :|.....
 Frog     3 VVTVQLGQCGNQVGYEFFDILCSDLHSKPGHST---------KRENDYYQTVCKEQFFHEEECGD 58

  Fly    59 YVPRAILVDLEPGTMDSVRS--GAFGQIFRPDNFVFGQ-SGAGNNWAKGHYTEGAELVDSVLDVV 120
            .|.||:|||:||..:....|  |..|:.....:..|.| .|.|||||.|:...|.:..|.|:|:|
 Frog    59 LVTRAVLVDMEPKVVSKTLSMAGRSGKWKYDISSQFSQKQGCGNNWANGYCVHGPKHQDIVMDLV 123

  Fly   121 RKESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
            ||:.|.||.|.||....|:.|||||||||.|...:|:.|||.::....:.|. ...:.:|:.||:
 Frog   124 RKQVEKCDRLGGFFTIMSMAGGTGSGMGTFLTRCLRDAYPDSLLLNQVIWPY-GTGEVIVQNYNS 187

  Fly   186 TLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLN----HLVSATMSGVTTCLRFPGQL 246
            .|::..|..::|.....:|:.::.:|.:.:.:...::.|:|    |.:.:....|.|........
 Frog   188 ILTLSHLYRSSDALLVHENDIIHKVCSQLMNIKQISFRDVNKVIAHQLGSIFQPVYTSEEALHYC 252

  Fly   247 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL---TVPELTQ-----QMFDAKNMMAAC 303
            ...|.:|...:||.|                  :|:.|   .:|::::     ..|:...::   
 Frog   253 RNPLGELMECLVPHP------------------EYKMLGLRNIPQMSEHSLAYSTFNWNGLL--- 296

  Fly   304 DPRHGRYLTVA--------------------------------------AIFRGRMSMKEVDEQM 330
              :|.|.:.:|                                      ||.||:      |.|.
 Frog   297 --KHLRQMLIANAKMEEGINWHVRPPSQPTAEKTSLRKELQFNTSVANLAILRGK------DVQT 353

  Fly   331 LNIQN-KNSSFFVEWI-PNNC----KTAVCDIPPRGL---KMSATFIGNSTAIQELFKRVSEQFT 386
            .:::. ::...:..|: |::.    ||      ||..   :.|||.:.||..:.:....:..:..
 Frog   354 ASLEGFRDPPLYTPWLSPDDAFTLWKT------PRAFNKYEKSATLVSNSQFLLKPLDNIVGKAW 412

  Fly   387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
            .||..||::|.||..|:||.||.|..:.:..:::.|
 Frog   413 NMFASKAYVHQYTKFGIDEEEFLETFTTLEQIIASY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 124/491 (25%)
tubd1NP_001006747.1 delta_zeta_tubulin-like 2..450 CDD:276958 124/491 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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