DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tuba8l3

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001003558.1 Gene:tuba8l3 / 445164 ZFINID:ZDB-GENE-040801-77 Length:450 Species:Danio rerio


Alignment Length:456 Identity:181/456 - (39%)
Similarity:268/456 - (58%) Gaps:23/456 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATG------TYYGDSDLQLERINVYYNEATGAKY 59
            |||.:.:..||.|.|:|...||:...||.|...|      |..|..|    ..|.:::|....|:
Zfish     1 MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDD----SFNTFFSETGAGKH 61

  Fly    60 VPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 124
            |||||.|||||..:|.||:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.|||..||.:
Zfish    62 VPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLA 126

  Fly   125 EGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 189
            :.|..||||.:.||.|||||||..:||:.::..:|..:....|::.|:|:||..||||||:.|:.
Zfish   127 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191

  Fly   190 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 254
            |..:|::|..:.:||||:||||.:.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:..
Zfish   192 HTTLEHSDCAFMVDNEAIYDICRKNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

  Fly   255 VNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRG 319
            .|:||:||:||.:..:||:.|.....:..|:|.::|...|:..|.|..||||||:|:....::||
Zfish   257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPSNQMVKCDPRHGKYMACCLLYRG 321

  Fly   320 RMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPP--------RGLKMSATFIGNSTAIQE 376
            .:..|:|:..:..|:.|.:..||:|.|...|..:...||        ..::.:...:.|:|||.|
Zfish   322 DVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386

  Fly   377 LFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEE 441
            .:.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:   |:|...|..||  ||||
Zfish   387 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKD---YEEVGTDSMGE--EDEE 446

  Fly   442 G 442
            |
Zfish   447 G 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 173/442 (39%)
tuba8l3NP_001003558.1 PTZ00335 1..439 CDD:185562 173/444 (39%)
alpha_tubulin 2..435 CDD:276955 171/439 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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