DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tube1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_957279.2 Gene:tube1 / 393960 ZFINID:ZDB-GENE-040426-1174 Length:470 Species:Danio rerio


Alignment Length:459 Identity:152/459 - (33%)
Similarity:241/459 - (52%) Gaps:44/459 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHC-IDATGTYYGDSDLQLERINV-----YYNEATGAKY 59
            |.:.|.:|.||||||:|.:||::...||. ::..|.|  |..|.....||     |..||||.|.
Zfish     1 MTQSVVVQVGQCGNQVGCRFWDLALREHAHVNQMGVY--DDALSSFFRNVDQRRGYGAEATGGKI 63

  Fly    60 V---PRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
            .   .||:|||:|.|.:..:..|....:|.....:...||:|||||.||:|.|....:.::|.||
Zfish    64 TGLKARAVLVDMEEGVLGGILQGPLRSLFSSAQLISDVSGSGNNWAVGHHTYGLAYREQIVDQVR 128

  Fly   122 KESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNAT 186
            |.:|.|||||.|.|.||:|||||||:||.::..:.||:|:......||.|:.: .|.:..|||:.
Zfish   129 KAAEHCDCLQCFFLIHSMGGGTGSGLGTFVLKLLEEEFPEVYRIVTSVYPTAE-DDVITSPYNSV 192

  Fly   187 LSVHQLVENTDETYCIDNEALYDICFR--------------------------TLKLTTPTYGDL 225
            |::.:|.|:.|....:||::|.||..:                          .:|:..| :..:
Zfish   193 LAMKELTEHADCVLPVDNQSLVDIVGKIKHMSNTGKPGCAIKKDSTIISGQGGVVKVEKP-FDAM 256

  Fly   226 NHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 290
            |::|:..:..:|:..||.|.||.||.::|:|:|||||||:.:....||.:..........:.::.
Zfish   257 NNIVANLLLNITSSARFEGSLNMDLNEIAMNLVPFPRLHYLVSSLTPLYTLADVSVPPRRLDQMF 321

  Fly   291 QQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSF-FVEWIPNNCKTAVC 354
            ...|..::.:...||:|..||..|.:.||.:.:.::..   ||:....:. ||.|.....||::|
Zfish   322 SDAFSKEHQLIRADPKHNLYLACALMLRGNVQLSDLRR---NIERLRPTLPFVPWNQEGWKTSLC 383

  Fly   355 DIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDL 418
            .:.|.|...|...:.|:|.::..|..:.|:|..::||||.||.|.. :||::..||||.|:::.|
Zfish   384 SVLPVGHSHSLLALANNTCVKSTFSELRERFMKLYRRKAHLHHYLAVDGMEQSGFTEALSSISTL 448

  Fly   419 VSEY 422
            :.:|
Zfish   449 IEDY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 152/459 (33%)
tube1NP_957279.2 PTZ00387 1..467 CDD:240395 152/459 (33%)
epsilon_tubulin 2..455 CDD:276959 151/458 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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