DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and gammaTub37C

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:439 Identity:149/439 - (33%)
Similarity:253/439 - (57%) Gaps:23/439 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILVD 67
            ||:.:|.||||||||.:||:.:..||.|...|.....:....:|.:|::.:|....|:|||:|:|
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68

  Fly    68 LEPGTMDSVRSGAFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCL 130
            |||..::::.:..:.:::..:|....:  .|||||||.| :::|.::.:.|.|::.:|::|.|.|
  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132

  Fly   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVE 194
            :||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:|.:
  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197

  Fly   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            ..|....:||.||..|....|.:.|||:..:|:|||..||..||.||:|..:|.:|..|..:::|
  Fly   198 CADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIP 262

  Fly   260 FPRLHFFMPGFAPLTS--RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTVAAIFRG 319
            .|:|||.|.|:.||.|  ......|..||.::.:::...|||| :|...:..|  ::::..|.:|
  Fly   263 TPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQG 327

  Fly   320 RMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRGL-------KMSATFIGNSTAIQEL 377
            .:...:|.:.:..|:.:..:.|:.|.|.:.:.|:    ||..       |:|...:.|.|.|..|
  Fly   328 EVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGISSL 388

  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 423
            |||...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
  Fly   389 FKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 149/439 (34%)
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 149/439 (34%)
gamma_tubulin 4..436 CDD:276957 147/436 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443479
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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