DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tuba5

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_997937.1 Gene:tuba5 / 337223 ZFINID:ZDB-GENE-030131-9167 Length:449 Species:Danio rerio


Alignment Length:454 Identity:182/454 - (40%)
Similarity:270/454 - (59%) Gaps:19/454 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTY-----YGDSDLQLERINVYYNEATGAKYV 60
            |||.:.|..||.|.|||...||:...||.|...|..     .|.||   :..|.:::|....|:|
Zfish     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGNMPSDKTIGKSD---DSFNTFFSETGSGKHV 62

  Fly    61 PRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 125
            |||:.|||||..:|.||||.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.||:.|||.::
Zfish    63 PRAVFVDLEPAVIDEVRSGTYRQLFHPEQLISGKEDAANNYARGHYTVGKEIIDMVLERVRKLTD 127

  Fly   126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190
            .|..||||.:.||.|||||||..:||:.::..:|..:....|::.|:|:||..||||||:.|:.|
Zfish   128 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192

  Fly   191 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255
            ..:|::|..:.:||||:||||.|.|.:..|:|.:||.|:...:|.:|..|||.|.||.||.:...
Zfish   193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT 257

  Fly   256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGR 320
            |:||:||:||.:..::|:.|.....:..|:|.|:|...|:..|.|..||||||:|:....::||.
Zfish   258 NLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITSACFEPSNQMVKCDPRHGKYMACCMLYRGD 322

  Fly   321 MSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPP--------RGLKMSATFIGNSTAIQEL 377
            :..|:|:..:.||:.|.|..||:|.|...|..:...||        ..::.:...:.|:|||.|.
Zfish   323 VVPKDVNAAIANIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAISEA 387

  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEE 441
            :.|:..:|..|:.::||:|||.||||:|.||:||.   .||.:..:.|:|..||...:.:|.||
Zfish   388 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGADSTEDGEEGEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 177/441 (40%)
tuba5NP_997937.1 PTZ00335 1..449 CDD:185562 182/454 (40%)
alpha_tubulin 2..435 CDD:276955 175/438 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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