DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and nda3

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_596650.1 Gene:nda3 / 2540582 PomBaseID:SPBC26H8.07c Length:448 Species:Schizosaccharomyces pombe


Alignment Length:444 Identity:334/444 - (75%)
Similarity:389/444 - (87%) Gaps:3/444 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAIL 65
            |||||||||||||||:|..||..|:|||.:|:.|.|:|.|:.|.||:|||:|||.|.||||||:|
pombe     1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYVPRAVL 65

  Fly    66 VDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCL 130
            |||||||||:|:||.||.:|||||.::|||||||.||||||||||||.|:||||||:|:|.||.|
pombe    66 VDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDAL 130

  Fly   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVEN 195
            |||||||||||||||||||||:||||||||||:|.||||.|:||.|||||||||||||:||||||
pombe   131 QGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVEN 195

  Fly   196 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
            :|||:|||||||..|...|||:.:|:|.||||||||.|:||||..||||:||:||||||||||||
pombe   196 SDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPF 260

  Fly   261 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKE 325
            |||||||.|||||.:.||..::|::|||||||||||.|||.|.||||||||||||:|||::||||
pombe   261 PRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKE 325

  Fly   326 VDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFR 390
            ||||:.::|.|||::||||||:|...|||.:||:.||||||||||||:|||:|:|:.:||:||||
pombe   326 VDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFR 390

  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA---TADEEGEFDEDEE 441
            ||||||||||||||||||||||||||||||||||||||   ..||:.|.:|::|
pombe   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGIDEGDEDYEIEEEKE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 329/431 (76%)
nda3NP_596650.1 beta_tubulin 2..426 CDD:276956 324/423 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 359 1.000 Domainoid score I157
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 718 1.000 Inparanoid score I93
OMA 1 1.010 - - QHG53784
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 1 1.000 - - otm47174
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
TreeFam 00.000 Not matched by this tool.
1110.870

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