DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tba-5

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_492268.1 Gene:tba-5 / 184569 WormBaseID:WBGene00006531 Length:447 Species:Caenorhabditis elegans


Alignment Length:454 Identity:179/454 - (39%)
Similarity:272/454 - (59%) Gaps:22/454 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCIDATG-----TYYGDSDLQLERINVYYNEATGAKYV 60
            |||||.|..||.|.|||...||:...||.|...|     |.||..|   :..|.:::|....|:|
 Worm     1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVED---QSYNTFFSETPSGKHV 62

  Fly    61 PRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 125
            ||||.|||||..:|.||:|.:.::|.|:..:.|:..|.||:|:||||.|.||:|.|:|.||:.:|
 Worm    63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTE 127

  Fly   126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190
            .|..||||.:.||.|||||||..:|::.::..:|..:....||:.|:|::|.::|||||:.|:.|
 Worm   128 RCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTH 192

  Fly   191 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255
            ..:|::|.::.:||||:|:|....|.:.:|||..||.|::..:|.:|..|||.|.||.||.:...
 Worm   193 TTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQT 257

  Fly   256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGR 320
            |:||:||:||.:..:||:.|.....:..|:|.|:|...|:..:.|..||||:|:|:....::||.
 Worm   258 NLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGD 322

  Fly   321 MSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPP--------RGLKMSATFIGNSTAIQEL 377
            :..||::..:..|:.|.:..||:|.|...|..:...||        ..|:.:...:.|:|||||.
 Worm   323 VVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEA 387

  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEE 441
            :.|:..:|..|:.::||:|||.||||:|.||:||..:|..|..:   |:|...|   .||.::|
 Worm   388 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKD---YEEVGVD---SFDPNDE 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 175/441 (40%)
tba-5NP_492268.1 PTZ00335 1..446 CDD:185562 179/454 (39%)
alpha_tubulin 2..435 CDD:276955 173/438 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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