DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub85D and CG32396

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_729172.1 Gene:CG32396 / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster


Alignment Length:445 Identity:242/445 - (54%)
Similarity:313/445 - (70%) Gaps:12/445 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCID-ATGTYYGDSDLQLERINVYYNEATGAKYVPRAI 64
            |||||.:|.|..||.||..||.|||.||.:| |:|.:.|.|.||||||||::|.....::..|.|
  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65

  Fly    65 LVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDC 129
            |:|.|..|:.  |..|..|::||:|||.|...||||:|:|::|:||.::|.||:..|:|.|..|.
  Fly    66 LIDTEASTIQ--RLNASSQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128

  Fly   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 194
            ||||||.||:|||||||:.:|::..:.|:|||.::..:..:|||.:|..|||||||.||...||.
  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193

  Fly   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            |:..|:|:|||||:.||.|.|||....|..:||:|:.||||:||||||||||||.|||:.|||||
  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258

  Fly   260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
            ||||||.:||||||.:...||:...||.||.||:|.:.|::.|.|.|.|:.||.|.|||||||.:
  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323

  Fly   325 EVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMF 389
            |||:.|..::|||.:.||:|||||.|||:|||||||||||||||||:||||.||:|:.:...:|.
  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388

  Fly   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDEDEEGGG 444
            ||||.|||||||||:|.||.:|:..:..::.:|:...|.         ||..|||
  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEG---------EDSGGGG 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 237/429 (55%)
CG32396NP_729172.1 PTZ00010 1..421 CDD:240228 235/421 (56%)
beta_tubulin 2..425 CDD:276956 235/424 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S24
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.