DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and Tubg1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_598785.1 Gene:Tubg1 / 103733 MGIID:101834 Length:451 Species:Mus musculus


Alignment Length:438 Identity:148/438 - (33%)
Similarity:255/438 - (58%) Gaps:22/438 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILV 66
            |||:.:|.||||||||.:||:.:..||.|...|.....:....:|.:|::.:|....|:|||:|:
Mouse     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLL 67

  Fly    67 DLEPGTMDSVRSGAFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDC 129
            ||||..:.|:.:.::.:::.|:|....:  .|||||||.| :::|.::.:.:.|::.:|::|.|.
Mouse    68 DLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDS 131

  Fly   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLV 193
            |:||.|.||:.||||||:|:.|:.::.:.||.:::.|:||.|: .::||.||:|||:.|::.:|.
Mouse   132 LEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLT 196

  Fly   194 ENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMV 258
            :|.|....:||.||..|....|.:..|::..:|.|||..||..||.||:||.:|.||..|..:::
Mouse   197 QNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLI 261

  Fly   259 PFPRLHFFMPGFAPLTSRGS-QQYRALTVPELTQQMFDAKNMMAACDPRHGR-------YLTVAA 315
            |.|||||.|.|:.|||:..| ...|..||.::.:::...||:|.:.    ||       |:.:..
Mouse   262 PTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILN 322

  Fly   316 IFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAV---CDIPPRGLKMSATFIGNSTAIQEL 377
            |.:|.:...:|.:.:..|:.:..:.|:.|.|.:.:.|:   ....|...::|...:.|.|:|..|
Mouse   323 IIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSL 387

  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN---MNDLVSEY 422
            |:|...||..:.:|:||:..:..|.:.:..|.|.:::   :..|:.||
Mouse   388 FERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 148/438 (34%)
Tubg1NP_598785.1 gamma_tubulin 3..435 CDD:276957 146/436 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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