DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub85D and tubz1

DIOPT Version :9

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:470 Identity:126/470 - (26%)
Similarity:199/470 - (42%) Gaps:95/470 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVHIQAGQCGNQIGGKFWEVISDEHCIDATGT----YYGDSDLQLERINVYYNEATGAKYVPRAI 64
            ::.:|.||||||||.::|.::    |.:|:.|    |:....:    ||              ||
 Frog     3 LIWLQVGQCGNQIGQEWWHLL----CNNASDTDRYPYFSRDGM----IN--------------AI 45

  Fly    65 LVDLEPGTM----DSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL----DVVR 121
            .||.||..:    ..|:.|:    .|..|.:.|:.|.|||||.|:..:|.:...|:|    :..|
 Frog    46 CVDSEPKVIRKLWKRVKKGS----LRDSNLIVGRKGRGNNWAFGYSGDGTDTEKSLLARTMESFR 106

  Fly   122 KESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNAT 186
            .|.|..||..|..|.|||.||||||:|..|..:||:.||...:.:.:|.|. :..||.::.||:.
 Frog   107 HELERRDCYSGTVLLHSLCGGTGSGLGARLCEEIRDTYPAGHILSVAVAPH-ETGDTPLQHYNSL 170

  Fly   187 LSVHQLVENTDETYCIDNEALYDICFRTLKL---TTPTYGDLNHLVS--ATMSGVTTCLR---FP 243
            |.:..|...:|......|:   ||..|...|   ..|....:...||  |..|.:.:||.   :|
 Frog   171 LCLSWLQRYSDGILLFQND---DIMHRVAALGEKKVPLVSGVEAPVSIAAMNSHIASCLAGLLYP 232

  Fly   244 GQLNADLRKLAVNMVPFPRLHFFMP-------GFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
            .........::|.:.|:..:....|       ..|.:..||:..:..:|: .||      ||:  
 Frog   233 TNTLRTRSAVSVGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPFWDRVTL-SLT------KNI-- 288

  Fly   302 ACDPR---HGR------YLTVAAIFRGRMSMKEVDEQMLNIQNKNSSFFVEWIP---------NN 348
               ||   .||      .|.|:...:.:..:...|..::.:  |.|...|.|.|         .|
 Frog   289 ---PRTSPDGRLHHSTSLLAVSRASQDKPFLLSQDSVLMKL--KQSYRCVPWNPFPIDYWTGSQN 348

  Fly   349 CKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
            .      :.|.....|.|...|.::..:|..||.::..:|:..:|:||||...|.:|.:|..|..
 Frog   349 I------LDPSQQSHSLTVCANHSSAADLMSRVIQRAQSMYEARAYLHWYQRYGCEEEDFQGAFH 407

  Fly   414 NMNDLVSEYQQYQEA 428
            .::.:|.||.:..|:
 Frog   408 TLHSVVEEYNKLGES 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 126/470 (27%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 124/463 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.