DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub85D and tube1

DIOPT Version :10

Sequence 1:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001016136.1 Gene:tube1 / 100488997 XenbaseID:XB-GENE-492734 Length:472 Species:Xenopus tropicalis


Alignment Length:458 Identity:140/458 - (30%)
Similarity:236/458 - (51%) Gaps:38/458 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVHIQAGQCGNQIGGKFWEVISDEHCI--------DATGTYYGDSDLQLERINVYYNEATGA 57
            |.:.:.:|.||||||||.:||::...||..        :|..:::.:.|.:.|............
 Frog     1 MTQSIVVQVGQCGNQIGCRFWDLALREHASVNKKGIFDEALCSFFRNVDTRAEAGGADAQRGKIC 65

  Fly    58 KYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 122
            ....||:|:|:|.|.::.:..|....:|.....:...||:|||||.||...|.:..:.:::.:|:
 Frog    66 SLKARAVLIDMEEGVVNEILQGPLRDLFDSKQLITDVSGSGNNWAVGHKLYGGQYREHIVENLRR 130

  Fly   123 ESEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
            .:|.|||||.|.:.||:|||||||:||.:::.:.||:|:......||.||.: .|.:..|||:.|
 Frog   131 TAEQCDCLQCFFVIHSMGGGTGSGLGTFVLNVLEEEFPEVYRFVTSVYPSAE-DDVITSPYNSVL 194

  Fly   188 SVHQLVENTDETYCIDNEALYDIC--------------FRTLKLTTPTYGD----------LNHL 228
            ::.:|.|:.|....|:|:||.||.              .::..|.|...|.          :|::
 Frog   195 AMKELTEHADCVLPIENQALVDIVNKINQMANTGKLGNVKSNSLLTSNKGGIKENEKPFDAMNNI 259

  Fly   229 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
            |:..:..:|:..||.|.||.||.::::|:||||:||:......||.:..........:.::....
 Frog   260 VANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLTSSLTPLYTLADVNVPTRRLDQMFSDA 324

  Fly   294 FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQN-KNSSFFVEWIPNNCKTAVCDIP 357
            |...:.:...||:|..||..|.:.||.:   ::.:...||:. |....||.|.....||.:|.:|
 Frog   325 FSKDHQLIRADPKHSLYLACALMVRGNV---QISDLRRNIERLKPFLQFVSWNQEGWKTGLCSVP 386

  Fly   358 PRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSE 421
            |.|...|...:.|:|.::..|..:.::|:.::|:||.||.|.. :||::..||||.|:::.|:.|
 Frog   387 PVGHSHSLLALANNTCVKPTFIELRDRFSKLYRKKAHLHHYMQVDGMEQHCFTEAISSLSSLIEE 451

  Fly   422 YQQ 424
            |.|
 Frog   452 YSQ 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 140/458 (31%)
tube1NP_001016136.1 epsilon_tubulin 2..455 CDD:276959 139/457 (30%)

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