DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8135 and Lmbrd2

DIOPT Version :9

Sequence 1:NP_649890.1 Gene:CG8135 / 41123 FlyBaseID:FBgn0037689 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001102647.1 Gene:Lmbrd2 / 499539 RGDID:1563920 Length:694 Species:Rattus norvegicus


Alignment Length:733 Identity:310/733 - (42%)
Similarity:435/733 - (59%) Gaps:87/733 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSFGIVAALFLASISLYRYGNIPRQHILVTLSVLTAWCFSFLIVFTIPLDVTSTLYRQCVEEHRP 69
            |...||...|||...|:|||:..:||.||.:..|.||...|||||.:||||::|:|.:|......
  Rat     6 LGLEIVFVFFLALFLLHRYGDFKKQHRLVIVGTLLAWYLCFLIVFILPLDVSTTIYNRCRHAAAN 70

  Fly    70 TPAPNVTNTSS--ATVGPPPQ---CQEPWGMVPASVFPNLWRIIYWSSQFLTWLIMPLMQSYLKA 129
            :..|..:|.:.  |:|.|..:   |.:||..:|..:.|..||::||:||||||:::|.||||.::
  Rat    71 SSPPENSNVTGVYASVTPAQRQHPCFKPWSYIPDGIMPIFWRVVYWTSQFLTWILLPFMQSYARS 135

  Fly   130 GDFTVKGKLKSALIENAIYYGSYLFICGVLLIYIAVKGE-SLDWQKLKAIASSASNTWGLFLLIL 193
            |.|::.||:|:||||||||||:||.|.|..|||:||... .|:|.:|:.|..:|:||||||||:|
  Rat   136 GGFSITGKIKTALIENAIYYGTYLLIFGAFLIYVAVNPRLHLEWNQLQTIGIAAANTWGLFLLVL 200

  Fly   194 LLGYALVEVPRSLWNNAKPGFALQYAYFKAAKLSTEKAEAEEHVDDILESLQGLSRVIPNNHELR 258
            ||||.|||:|||.||.||.|:.|...|||||||.||||:|||:::|::|.::.::..|..||.||
  Rat   201 LLGYGLVEIPRSYWNGAKRGYLLMKTYFKAAKLMTEKADAEENLEDVMEEVRKVNESIKYNHPLR 265

  Fly   259 PCLETILRKVPIELQERASRN------FARTGGSGMGATSSTILPSEKALVRIHKQVIKSLQTLQ 317
            .|::|||:|.|.:.||:..||      |..         .....||||:||::|||||.|:|..:
  Rat   266 KCVDTILKKCPTDYQEKMGRNMDDYEDFDE---------KRNTYPSEKSLVKLHKQVIYSVQRHR 321

  Fly   318 RTEALWSVQVQTVLHLEDVAKNIHSSDRRFKSEF--PRQRTQLERICYSASLQWYWECLLKAPFL 380
            ||:..|.:.::...:|||||||..|:..:|...|  |....:..:..|:.:::|||||||:..|.
  Rat   322 RTQVQWQILLEQAFYLEDVAKNETSATHQFVHTFQSPEPENRFIQYFYNPTVEWYWECLLRPWFH 386

  Fly   381 KTMCVLTATMSAMVVWSELTFFSRHPVLSIFANVIYVAKESYDFFTIEVFSMVVLCYFFYCTYST 445
            :.:.|:.:..|.:|||||.||||..||||:||..|.:|:::|::..||:...:.:.:...|.|||
  Rat   387 RILAVVLSIFSVIVVWSECTFFSTTPVLSLFAVFIQLAEKTYNYIYIEIACFLSIFFLSICVYST 451

  Fly   446 ILRIRFLNLYYLAPHHQTNEHSLIFSGMLLCRLTPPMCLNFLGLIHMDTHIIPNRIMETVYTQIM 510
            :.|||..|.||||.||||:.:||:|||||.||||||:|||||||.|||..|.......|.||.||
  Rat   452 VFRIRVFNYYYLASHHQTDAYSLLFSGMLFCRLTPPLCLNFLGLTHMDASISHQNTQPTAYTSIM 516

  Fly   511 GHMDVIGIISNGFNIYFPMCMLAFCLATWFSLGSRALNALGFQQFLQNETIATELVQEGKDLIAR 575
            |.|.|:..|::||.||:||.::..|:||:||||:|.||.||||||:.:..:.::||.|||:||.|
  Rat   517 GSMKVLSFIADGFYIYYPMLVVILCIATYFSLGTRCLNLLGFQQFMGDNDMTSDLVDEGKELIRR 581

  Fly   576 EKRRRQRAEEAMARRRDF------NRTDQVLG----------------SDYLSKYRSGGPGGLTS 618
            |||:|||.||...|||::      ||.|....                :::.|||..      .:
  Rat   582 EKRKRQRQEEGENRRREWKERYGHNREDSTRNRNVHSDPKESNFSDTTTNWSSKYTR------AN 640

  Fly   619 SRTPAD--GLLRDGDGSFDYAAVASSSALGVPRSLSEEINDRFGVSTQVQVGFRDPDYEAET--- 678
            :||..|  .||:|.:                |...:.|.             |.|...|.|:   
  Rat   641 NRTERDRIELLQDAE----------------PLDFNAET-------------FTDDSLEPESGRY 676

  Fly   679 --DGRIVGPPPRGLFDDV 694
              .||.:......:|:|:
  Rat   677 QPGGRYLSMSSSIIFEDI 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8135NP_649890.1 LMBR1 7..540 CDD:282625 255/546 (47%)
Lmbrd2NP_001102647.1 LMBR1 1..549 CDD:398455 258/551 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341967
Domainoid 1 1.000 527 1.000 Domainoid score I281
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44696
Inparanoid 1 1.050 583 1.000 Inparanoid score I974
OMA 1 1.010 - - QHG53885
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004974
OrthoInspector 1 1.000 - - oto96888
orthoMCL 1 0.900 - - OOG6_101796
Panther 1 1.100 - - LDO PTHR21355
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3508
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.900

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