DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8132 and nit2

DIOPT Version :9

Sequence 1:NP_649888.1 Gene:CG8132 / 41121 FlyBaseID:FBgn0037687 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_991174.3 Gene:nit2 / 402904 ZFINID:ZDB-GENE-050522-65 Length:284 Species:Danio rerio


Alignment Length:278 Identity:151/278 - (54%)
Similarity:196/278 - (70%) Gaps:9/278 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKTSNIMRLALLQLKGSKDKVANVQNAVTKI-EAAVKEHKPRLITLPECFNAPYGTKYFREYSE 64
            |||    .|||::||..||.|..|:..|.|.: |||.:..|  ::.||||||:||||.:|:||:|
Zfish     8 MSK----FRLAVVQLHVSKIKADNLGRAQTLVTEAAGQGAK--VVVLPECFNSPYGTGFFKEYAE 66

  Fly    65 TIPDGYTSQQLSNLARKHQVYIVGGTIPELGENDAIYNTCTVWSPTGDLVAKHRKMHLFDIDVKG 129
            .|| |.::|.||..|:|..:|:|||:||| .:...:||||:|:.|.|.|:..|||:|||||||.|
Zfish    67 KIP-GESTQVLSETAKKCGIYLVGGSIPE-EDGGKLYNTCSVFGPDGKLLVTHRKIHLFDIDVPG 129

  Fly   130 GIRFKESETLSAGNDFTIINVDGHKIGIGICYDIRFEEMARLYRNAGCEMIIYPAAFNMTTGPLH 194
            .|||:||||||.|...::......|:|:||||||||.|:|::|...||::::||.||||||||.|
Zfish   130 KIRFQESETLSPGKSLSMFETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNMTTGPAH 194

  Fly   195 WELLQRSRANDNQLFVVTTSPARDTSAEYVAYGHSMVVNPWAKVQQSASEGEEIVVADIDFSEVE 259
            ||||||.||.|||::|.|.|||||.:|.|||:|||.|:|||.:|...|...|.:|.||||...:.
Zfish   195 WELLQRGRAVDNQVYVATASPARDETASYVAWGHSSVINPWGEVISKAGSEESVVYADIDLQYLA 259

  Fly   260 QVRQQIPVFGQRRLDLYA 277
            .||||||:..|||.|||:
Zfish   260 DVRQQIPITKQRRNDLYS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8132NP_649888.1 nit 9..272 CDD:143596 143/263 (54%)
nit2NP_991174.3 nit 12..272 CDD:143596 143/263 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594471
Domainoid 1 1.000 280 1.000 Domainoid score I1652
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6520
Inparanoid 1 1.050 297 1.000 Inparanoid score I2715
OMA 1 1.010 - - QHG62384
OrthoDB 1 1.010 - - D1154369at2759
OrthoFinder 1 1.000 - - FOG0001670
OrthoInspector 1 1.000 - - oto41360
orthoMCL 1 0.900 - - OOG6_100517
Panther 1 1.100 - - LDO PTHR23088
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1707
SonicParanoid 1 1.000 - - X1563
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.