DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8132 and Upb1

DIOPT Version :9

Sequence 1:NP_649888.1 Gene:CG8132 / 41121 FlyBaseID:FBgn0037687 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_598756.1 Gene:Upb1 / 103149 MGIID:2143535 Length:393 Species:Mus musculus


Alignment Length:307 Identity:73/307 - (23%)
Similarity:126/307 - (41%) Gaps:43/307 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IMRLALLQLKGSKDKVANVQNAVTKIEAAVKEHKP-------RLITLPECFNAPYG--TKY---F 59
            |:|:.|:|.:......|.|...|:.:..:::|...       .:|...|.:|.|:.  |:.   :
Mouse    71 IVRVGLVQNRIPLPTSAPVAEQVSALHKSIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPW 135

  Fly    60 REYSETIPDGYTSQQLSNLARKHQVYIVGGTIPELGENDAI-YNTCTVWSPTGDLVAKHRKMHLF 123
            .|::|:..||.|::....||:||.:.:|...:....|:..: :||..|.|.:|.::.|.||.|:.
Mouse   136 TEFAESAEDGLTTRFCQKLAKKHNMVVVSPILERDREHGGVLWNTAVVISNSGLVMGKTRKNHIP 200

  Fly   124 DIDVKGGIRFKESETLSAGN-DFTIINVDGHKIGIGICYDIRFEEMARLYRNAGCEMIIYPAAFN 187
            .:.     .|.||.....|| ...:......:|.:.|||.........:|...|.|:|..|:|  
Mouse   201 RVG-----DFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSA-- 258

  Fly   188 MTTGPLH---WELLQRSRANDNQLFVVTTS-------PARDTSAE---------YVAYGHSMVVN 233
             |.|.|.   |.:..|:.|..|..|....:       |...||.:         |. ||.|.|..
Mouse   259 -TIGELSESLWPIEARNAAIANHCFTCALNRVGQEHFPNEFTSGDGKKAHHDLGYF-YGSSYVAA 321

  Fly   234 PWAKVQQSASEGEE-IVVADIDFSEVEQVRQQIPVFGQRRLDLYATE 279
            |........|..:: ::|.:::.:..:|:..........||::||.|
Mouse   322 PDGSRTPGLSRNQDGLLVTELNLNLCQQINDFWTFKMTGRLEMYARE 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8132NP_649888.1 nit 9..272 CDD:143596 67/296 (23%)
Upb1NP_598756.1 PLN00202 6..392 CDD:177792 73/307 (24%)
ML_beta-AS 9..371 CDD:143611 73/307 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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