DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34b and AT1G26880

DIOPT Version :10

Sequence 1:NP_649887.1 Gene:RpL34b / 41120 FlyBaseID:FBgn0037686 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_174010.1 Gene:AT1G26880 / 838331 AraportID:AT1G26880 Length:120 Species:Arabidopsis thaliana


Alignment Length:123 Identity:68/123 - (55%)
Similarity:86/123 - (69%) Gaps:6/123 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSE--RP 63
            |||||..|.|.||.|:||:.|||:||||:||||..||..:.|:|....::::||...||||  |.
plant     1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRS 65

  Fly    64 RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIV-KALKSQREALVKPVKAPKA 120
            |:|:..:||:|.|||||..|.:||||:||||:|||||| |.||.|:   .|...||||
plant    66 RLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQK---AKEKVAPKA 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34bNP_649887.1 Ribosomal_L34e 1..94 CDD:426119 51/94 (54%)
AT1G26880NP_174010.1 PLN03166 1..96 CDD:178710 51/94 (54%)

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