DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34b and rpl3401

DIOPT Version :10

Sequence 1:NP_649887.1 Gene:RpL34b / 41120 FlyBaseID:FBgn0037686 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_594438.1 Gene:rpl3401 / 2541989 PomBaseID:SPAC23A1.08C Length:112 Species:Schizosaccharomyces pombe


Alignment Length:112 Identity:61/112 - (54%)
Similarity:77/112 - (68%) Gaps:4/112 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSERPRM 65
            |.||:|.||||:||||||:.||::|||..:.|.::||..|:||||.....|:||...||.|..|:
pombe     1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARL 65

  Fly    66 SKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIV----KALKSQR 108
            |...|||.|.|||.|..:.:::||||||||||||||    |.|.||:
pombe    66 SHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKIVKQKLKQLSSQK 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34bNP_649887.1 Ribosomal_L34e 1..94 CDD:426119 48/92 (52%)
rpl3401NP_594438.1 Ribosomal_L34e 1..94 CDD:426119 48/92 (52%)

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