DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and itk

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_571179.1 Gene:itk / 798906 ZFINID:ZDB-GENE-990415-261 Length:616 Species:Danio rerio


Alignment Length:542 Identity:175/542 - (32%)
Similarity:260/542 - (47%) Gaps:89/542 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   833 QLKRSKPCKQCTKRR----RIHPSKSVFDFAKE-----FEVEQPAGSAADEQFCNCPPAGQKPVK 888
            :||..|..|:..:..    :.||     ||..|     .:..:...:...|.:    |.|.||:.
Zfish    99 RLKWVKALKEAIQNNSLFLKYHP-----DFWGEGKWRCCQQTEKLATGCSEYY----PNGAKPLP 154

  Fly   889 PSVQISGHKDHPFESSSGEL-----DENSDRDIDNDEEE--EDSASDDVLSMKD---HCYCVPSL 943
            |:...|.....|.|.....|     .|::|..:..|||.  .|.:..:..::||   :...||.:
Zfish   155 PTPDPSRRSSEPEERIVVALRNFIPKEHTDLPLQKDEEYFIVDCSEPNWWTVKDKDGNVGSVPCI 219

  Fly   944 AASISLSTNRPLYEEEWFHGVLPREEVVRLL---NNDGDFLVRETIRNEESQIVLSVC------- 998
            ..:..||.|  :.:.||::..:.|.|...||   |.||.|:|    ||.:...|.:|.       
Zfish   220 YVTEKLSNN--IEKFEWYNKDINRTEAEDLLMQENKDGGFMV----RNSKHAGVYTVSIFTRVSG 278

  Fly   999 WNGH-----KHFIVQTTGEGN----FRFEGPPFASIQELIMHQYHSELPVTVKSGAILRRPVC-- 1052
            .||.     ||:.::...||.    :..|...|.:|.|||  :||...|    :|.|.|...|  
Zfish   279 SNGEKCPQVKHYQIKVQSEGEKVLYYLAEKYLFPTIPELI--RYHQHNP----AGLITRLRHCVS 337

  Fly  1053 -------------RERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPDEQKR 1104
                         .::||:..|:|.|...:|.|.||.|:|...:..  :|||||.|.....|:  
Zfish   338 RNVPNSARIKELSSDKWEIHPDEVKLSVELGSGQFGLVWKGSWQDR--EVAVKTVREGFMSEE-- 398

  Fly  1105 KFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDA 1169
            :|.:|.:::.:..|..:|:|.|:..|:.||.:|.|.:..|.|..:||.....|:.:..:.||.|.
Zfish   399 EFKEEAQVMMKLSHNRLVQLYGVVTQRSPIYLVFEFMENGCLTEFLRAKKGKLSQKALLEMCLDV 463

  Fly  1170 AAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEAL 1232
            :.||.||||.|.||||||||||||.....|||:||||:|  .:::|..|.|.| .||:|::||.:
Zfish   464 SEGMAYLESSNFIHRDLAARNCLVSENSVVKIADFGMTRFVLDDQYTSSHGSK-FPVRWSSPEVI 527

  Fly  1233 NFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCW 1297
            .||||:|..||||:|:.|||::|:|.|||...:||...|.::.|:|:..|:..|:.:|.||...|
Zfish   528 KFGKYSSKSDVWSFGVFMWEVYSEGRTPYDNRSNSEVVETLNAGHRLLKPRLCPQSVYELMQWSW 592

  Fly  1298 AADAESRPHFDEIYNVVDALIL 1319
            ....|.||.|        ||:|
Zfish   593 KEKPEDRPSF--------ALLL 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 29/104 (28%)
TyrKc 1063..1311 CDD:197581 103/249 (41%)
PTKc_Fes_like 1067..1315 CDD:270637 101/249 (41%)
itkNP_571179.1 PH 5..110 CDD:278594 4/10 (40%)
PH_Btk 7..147 CDD:269944 10/56 (18%)
SH3_Tec_like 170..223 CDD:212702 11/52 (21%)
SH2_Tec_family 227..338 CDD:198188 35/122 (29%)
PKc_like 356..610 CDD:304357 107/264 (41%)
Pkinase_Tyr 361..609 CDD:285015 106/259 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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