DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and Fgfr1

DIOPT Version :10

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_077060.2 Gene:Fgfr1 / 79114 RGDID:620713 Length:822 Species:Rattus norvegicus


Alignment Length:762 Identity:177/762 - (23%)
Similarity:274/762 - (35%) Gaps:230/762 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   721 LVRMGKNHILNEEQDAKRTQPSQHHHSSGSDCPTNSSSSSSNNNNNNKNTSSNSNHSASQSTIIT 785
            |....:..|..||.:.:.:.|:.   |....|.|||.                   |.|.:|..:
  Rat    73 LAESNRTRITGEEVEVRDSIPAD---SGLYACVTNSP-------------------SGSDTTYFS 115

  Fly   786 STITTTITTTTTTTPSKENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRIH 850
            ..::..:.::.......::|          .:.|...||             ||     .||.:.
  Rat   116 VNVSDALPSSEDDDDDDDSS----------SEEKETDNT-------------KP-----NRRPVA 152

  Fly   851 PSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQ-----------KPVKPSVQISGHK------- 897
            |   .:...::.|.:..|..||......||.:|.           |..||..:|.|:|       
  Rat   153 P---YWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPSPTLRWLKNGKEFKPDHRIGGYKVRYATWS 214

  Fly   898 ---DHPFESSSGE---LDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAA------SISLS 950
               |....|..|.   :.||....|::..:.      ||:....|   .|.|.|      :::|.
  Rat   215 IIMDSVVPSDKGNYTCIVENEYGSINHTYQL------DVVERSPH---RPILQAGLPANKTVALG 270

  Fly   951 TN---------RPLYEEEWFHGV-----------LP---------------REEVVRLLN----N 976
            :|         .|....:|...:           ||               ..||:.|.|    :
  Rat   271 SNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFED 335

  Fly   977 DGDF-----------------LVRETIRNEESQIVLS-----------------VCWNGHKHFIV 1007
            .|::                 .|.|.:  ||...|::                 .|..|......
  Rat   336 AGEYTCLAGNSIGLSHHSAWLTVLEAL--EERPAVMTSPLYLEIIIYCTGAFLISCMVGSVIIYK 398

  Fly  1008 QTTGEGNFRFEGPPFASIQELIMHQYHSELP----VTV--------KSGAILRRPVCRE------ 1054
            ..:|.....|.       .::.:|:....:|    |||        .||.:|.||....      
  Rat   399 MKSGTKKSDFH-------SQMAVHKLAKSIPLRRQVTVSADSSASMNSGVLLVRPSRLSSSGTPM 456

  Fly  1055 -------------RWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLD-------VAVKTCRMTLP 1099
                         ||||..|.:||.:.:|.|.||.|..|:......|       ||||..:....
  Rat   457 LAGVSEYELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 521

  Fly  1100 DEQKRKFLQEGRILKQY-DHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKN---------- 1153
            ::.....:.|..::|.. .|.||:.|:|.|.|..|:.:::|....|:|..||:..          
  Rat   522 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 586

  Fly  1154 -----SNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSRE--EE 1211
                 ...|:::..:......|.||.||.||.||||||||||.||..::.:||:|||::|:  ..
  Rat   587 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 651

  Fly  1212 EYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTG 1276
            :|.......::||||.|||||....||...||||:|:|:||||:.|.:||.|:......:.:..|
  Rat   652 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 716

  Fly  1277 YRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVVDALILRLDN 1323
            :||..|.:...|:|.:|..||.|....||.|.::...:|.::....|
  Rat   717 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 20/153 (13%)
PTKc_Fes_like 1067..1315 CDD:270637 91/272 (33%)
Fgfr1NP_077060.2 IgI_1_FGFR 25..118 CDD:409362 13/66 (20%)
Ig strand A 25..28 CDD:409362
Ig strand A' 40..46 CDD:409362
Ig strand B 49..59 CDD:409362
Ig strand C 63..68 CDD:409362
Ig strand C' 71..73 CDD:409362 177/762 (23%)
Ig strand D 78..82 CDD:409362 0/3 (0%)
Ig strand E 85..90 CDD:409362 1/4 (25%)
Ig strand F 96..105 CDD:409362 3/8 (38%)
Ig strand G 108..118 CDD:409362 2/9 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162 9/72 (13%)
IgI_2_FGFR 153..247 CDD:409443 20/102 (20%)
Ig strand A 153..156 CDD:409443 1/5 (20%)
Heparin-binding 160..177 4/16 (25%)
Ig strand A' 164..169 CDD:409443 1/4 (25%)
Ig strand B 173..181 CDD:409443 2/7 (29%)
Ig strand C 187..192 CDD:409443 0/4 (0%)
Ig strand C' 195..197 CDD:409443 1/1 (100%)
Ig strand D 206..209 CDD:409443 1/2 (50%)
Ig strand E 213..218 CDD:409443 0/4 (0%)
Ig strand F 227..234 CDD:409443 0/6 (0%)
Ig strand G 237..247 CDD:409443 1/15 (7%)
Ig 255..359 CDD:472250 14/103 (14%)
Ig strand B 273..277 CDD:409444 0/3 (0%)
Ig strand C 286..290 CDD:409444 0/3 (0%)
Ig strand E 324..328 CDD:409444 2/3 (67%)
Ig strand F 338..343 CDD:409444 0/4 (0%)
Ig strand G 351..354 CDD:409444 0/2 (0%)
PTKc_FGFR1 464..765 CDD:270678 100/300 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..822
Blue background indicates that the domain is not in the aligned region.

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