DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and ptk6b

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001070140.1 Gene:ptk6b / 767734 ZFINID:ZDB-GENE-060929-1150 Length:511 Species:Danio rerio


Alignment Length:463 Identity:154/463 - (33%)
Similarity:233/463 - (50%) Gaps:49/463 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   885 KP-VKPSVQISGHKDHPFESSSGELDENSDRDID---NDEEEEDSASDD--VLSMKDHCYCVPSL 943
            || :||.:..|.:.:.....:..:....:|:::.   .|:.|....|.|  ..:.||....|.:.
Zfish    53 KPKIKPPLPPSANNNAAIYMALWDFKARNDQELSFKAGDKFEITDRSGDWWTANKKDIFGRVTTG 117

  Fly   944 AASISLSTNRPLYEEEWFHGVLPREEVVRLL----NNDGDFLVRETIRNEESQIVLSV-CWNGHK 1003
            ....:......:..:.||.|.:.|...|..|    ||.|.||||.: .:::...|||| .....|
Zfish   118 FVPYNYLARDSVESQPWFFGKMNRVGAVSHLMSDENNYGSFLVRVS-ESDDMGYVLSVRTKENAK 181

  Fly  1004 HFIVQTTGEGNFRFEGPPFASIQELIMHQYHSELPVTVKSGAILRRPVCR-----------ERWE 1057
            ||.:..||:..:......|:||.|:|.| |.|. |:::  |.:|..|..|           :.||
Zfish   182 HFKIFQTGDQFYVDALFKFSSIVEVIEH-YQSH-PLSI--GDLLSEPCIRIKPENVPPPSTDEWE 242

  Fly  1058 LSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCR----MTLPDEQKRKFLQEGRILKQYDH 1118
            |..::..|..::|.|:|.|||..|.|:.. .||:|..:    :.|     |:|..|.:|:|:..|
Zfish   243 LPKEEFQLENQLGSGHFADVYSGKWKNHS-KVAIKILKNNDALVL-----REFQLEVQIMKRLRH 301

  Fly  1119 PNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQ--MGMCRDAAAGMRYLESKNC 1181
            .:::.|..:|....|..|:.||:..|.||.:|| |..|.:.:.:  :.|....|.||.|||:.|.
Zfish   302 KHLISLFAVCTSSSPFYIITELIEKGDLLHFLR-NPEGRSLQMESLIDMAAQVADGMAYLEANNS 365

  Fly  1182 IHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVW 1244
            |||||||||.||...:..||:|||::|  :|..|:..|  |:||.|||||||:..|.|:|..|||
Zfish   366 IHRDLAARNVLVGDGYVCKIADFGLARIIKEPVYLSDD--KKIPYKWTAPEAIGHGTYSSKSDVW 428

  Fly  1245 SYGILMWEIFSKGDTPYSGMTNSRARERI-DTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHF- 1307
            |:|||::||.:.|..||.|:......:.| ...||||:|...|:.:|.:|..||..::..||:| 
Zfish   429 SFGILLYEIVTHGGIPYPGVNTGEVYDLITKENYRMPSPPKCPQAIYNIMRACWRIESVDRPNFK 493

  Fly  1308 ---DEIYN 1312
               ||:.|
Zfish   494 VLKDELDN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 30/90 (33%)
TyrKc 1063..1311 CDD:197581 102/260 (39%)
PTKc_Fes_like 1067..1315 CDD:270637 102/259 (39%)
ptk6bNP_001070140.1 SH3_Brk 70..126 CDD:212781 8/55 (15%)
SH2 132..216 CDD:214585 31/86 (36%)
PTKc_Srm_Brk 241..502 CDD:133248 106/270 (39%)
STYKc 250..499 CDD:214568 101/257 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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