DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and SYK

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001167638.1 Gene:SYK / 6850 HGNCID:11491 Length:635 Species:Homo sapiens


Alignment Length:561 Identity:161/561 - (28%)
Similarity:232/561 - (41%) Gaps:160/561 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 PAGQKPVKPSVQISGHKDHPFESSSGELDENSDRDIDND--EEEEDSASDDVLSMKDHCYCVPSL 943
            |.|.:|          |..|||    :|.||..|:....  ..:..:....::|.|      |.|
Human   110 PQGVQP----------KTGPFE----DLKENLIREYVKQTWNLQGQALEQAIISQK------PQL 154

  Fly   944 AASISLSTNRPLYEEEWFHGVLPREEVVRLL----NNDGDFLVRETIRN--------EESQIV-- 994
            ...|:.:.:..:   .||||.:.|||..:::    ..:|.||:|....|        .|.:::  
Human   155 EKLIATTAHEKM---PWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHY 216

  Fly   995 ---------LSV--------CWNGHKHFIVQTTG--------------EGNFRFEGPPFASIQEL 1028
                     ||:        .|...:|:..:..|              :||..|.|.|       
Human   217 RIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQKIGTQGNVNFGGRP------- 274

  Fly  1029 IMHQYHSELPVTVKSGAILRR-------------------------------------------- 1049
               |.....|.|..:|.|:.|                                            
Human   275 ---QLPGSHPATWSAGGIISRIKSYSFPKPGHRKSSPAQGNRQESTVSFNPYEPELAPWAADKGP 336

  Fly  1050 -----PVCRERWELSNDD-------VVLLER---------IGRGNFGDVYKA--KLKSTKLDVAV 1091
                 |:..|.:|....|       .|.|:|         :|.||||.|.|.  ::|.....|||
Human   337 QREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAV 401

  Fly  1092 KTCRMTLPDEQ-KRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSN 1155
            |..:....|.. |.:.|.|..:::|.|:|.||::|||| :.:..|:|||:...|.|..||::|.:
Human   402 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH 465

  Fly  1156 GLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMS---REEEEYIVSD 1217
             :..:..:.:....:.||:|||..|.:||||||||.|:..:|..||||||:|   |.:|.|..:.
Human   466 -VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529

  Fly  1218 GMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTP 1282
            ...:.||||.|||.:|:.|::|..||||:|:||||.||.|..||.||..|.....::.|.||..|
Human   530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594

  Fly  1283 KSTPEEMYRLMLQCWAADAESRPHFDEIYNVVDALILRLDN 1323
            ...|.|||.||..||..|.|:||.|       .|:.|||.|
Human   595 AGCPREMYDLMNLCWTYDVENRPGF-------AAVELRLRN 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 24/130 (18%)
TyrKc 1063..1311 CDD:197581 107/262 (41%)
PTKc_Fes_like 1067..1315 CDD:270637 105/262 (40%)
SYKNP_001167638.1 SH2_N-SH2_Zap70_Syk_like 13..116 CDD:198191 3/15 (20%)
Interdomain A 108..167 16/79 (20%)
SH2_C-SH2_Syk_like 164..262 CDD:198264 18/100 (18%)
Interdomain B 260..370 18/119 (15%)
PTKc_Syk 375..631 CDD:133247 109/263 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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