DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and jak3

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_002663133.4 Gene:jak3 / 561370 ZFINID:ZDB-GENE-070725-4 Length:1103 Species:Danio rerio


Alignment Length:359 Identity:102/359 - (28%)
Similarity:168/359 - (46%) Gaps:69/359 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1022 FASIQELIMH--QYHSELPVTVKSGAILRR------------------PVCRERWELSN------ 1060
            :..:.|||.|  ||..||..:.:|  |:|:                  |.....|:..|      
Zfish   745 WTELAELISHCMQYQPELRPSCRS--IIRQLNSLITSDYEILHATDTLPESNGFWKKLNIFKKQQ 807

  Fly  1061 DDVV------LLERIGRGNFGDV----YKAKLKSTKLDVAVKTC----RMTLPDEQKRKFLQEGR 1111
            :||.      .:..:|:||||.|    |.....:|...||||..    :.|:.|     |.:|.:
Zfish   808 EDVFEERYLRFISVLGKGNFGSVELCRYDPWGDNTGELVAVKELQSNKQATMAD-----FQREIQ 867

  Fly  1112 ILKQYDHPNIVKLIGICVQ--KQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMR 1174
            .:.......|||..|||..  :....:|||.:..|||:.|:.|:.:.:..|:.:........||.
Zfish   868 TISSLHCDYIVKYKGICYSTGRLSTKLVMEYLPYGSLIGYMEKHRHNVGNRKLLLFASQICKGME 932

  Fly  1175 YLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR----EEEEYIVSDGMKQIPVKWTAPEALNFG 1235
            ||:|...:||||||||.||..::.|||:|||:::    ::|.|.|:. ..:.||.|.|||:::..
Zfish   933 YLQSMRYVHRDLAARNILVASDNLVKIADFGLTKIIPVDKEYYRVTQ-PGESPVFWYAPESISEL 996

  Fly  1236 KYTSLCDVWSYGILMWEIFSKGDTP---------------YSGMTNSRARERIDTGYRMPTPKST 1285
            |::...||||:||::.|:||..|..               :|..........:...:|:|.|...
Zfish   997 KFSHKSDVWSFGIVLHELFSYCDISQNPKKLCIQKIGRYVHSPSMAIHLLTLLKNNWRLPAPAQC 1061

  Fly  1286 PEEMYRLMLQCWAADAESRPHFDEIYNVVDALIL 1319
            |.:::.:|:|||..::|:||.|..:.::::..:|
Zfish  1062 PLKVHSIMMQCWEFNSENRPSFSSLKDLIENSLL 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 8/18 (44%)
TyrKc 1063..1311 CDD:197581 86/282 (30%)
PTKc_Fes_like 1067..1315 CDD:270637 85/276 (31%)
jak3XP_002663133.4 B41 26..255 CDD:214604
FERM_C_JAK3 251..365 CDD:275413
SH2_Jak3 365..459 CDD:198243
PKc_like 521..774 CDD:304357 11/30 (37%)
Pkinase_Tyr 521..773 CDD:285015 11/29 (38%)
PTKc_Jak_rpt2 811..1091 CDD:270634 85/285 (30%)
TyrKc 816..1090 CDD:197581 85/279 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.