DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and ephb2b

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001314672.1 Gene:ephb2b / 554232 ZFINID:ZDB-GENE-050522-415 Length:989 Species:Danio rerio


Alignment Length:734 Identity:194/734 - (26%)
Similarity:294/734 - (40%) Gaps:222/734 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   721 LVRMGK-----NHILNEEQDAKRTQPSQHHHSSGSD-----CPTNSSSSSSNNNN---NNKNTSS 772
            :|.:|:     .|...|.....|..||....::..|     ||.||.:::....|   .|....:
Zfish   251 MVPIGRCMCKAGHEAVENGTVCRACPSGFFKTAQGDEKCLQCPINSRTTNDGATNCVCRNGYYRT 315

  Fly   773 NSNHSASQSTIITSTITTTITTTTTTT------PSKENSRLKFKVPKIQKKSKAIRNTFRSKLLN 831
            :|:......|.:.|.....|::...|:      |.:|..          .:...:.|..      
Zfish   316 DSDPLEMPCTTVPSAPQNVISSVNETSLMLEWNPPRETG----------GRDDVVYNII------ 364

  Fly   832 FQLKRSKPCKQCTKRR----------------------RIHPSKSVFDFAKEFEVEQPAGSAADE 874
                    ||.|...|                      |:..|..:......||: |.....:| 
Zfish   365 --------CKSCGGGRGGCTRCGDNVQFIPRQLGLTESRVFISDLLAHTQYTFEI-QAVNGVSD- 419

  Fly   875 QFCNCPPAGQKPVKP---SVQISGHKDHPFESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDH 936
                     |.|..|   ||.|:.::..|   |:..:.....|.||                   
Zfish   420 ---------QSPYSPQYTSVNITTNQAAP---STVSIMHQVSRTID------------------- 453

  Fly   937 CYCVPSLAASISLSTNRP--------LYEEEWF-------HGVLPREE----VVRLLNNDGDFLV 982
                     ||:||.::|        .||.:::       :..:.:.:    |:|.|...|.::.
Zfish   454 ---------SITLSWSQPDQPNGVILDYELQYYEKDQTEHNSSMVKSQTNTAVIRGLKPGGIYVF 509

  Fly   983 RETIRNEESQIVLSVC----WNGHKHFIVQTTGEGNFRFEGPPFASIQELIMHQYHSELPVTVKS 1043
            :...|        :|.    ::|..:|...|..|.|        .||||        :||:.:.|
Zfish   510 QVRAR--------TVAGFGRYSGKMYFQTMTEEEYN--------TSIQE--------KLPLIIGS 550

  Fly  1044 GA---------ILRRPVCRER---------------------------------WELSNDDV--- 1063
            .|         ::...||..|                                 :|..|:.|   
Zfish   551 AAAGLVFLIAVVVIIIVCNRRGFERADSEYTDKLQHYTSGHMSPGMKIYIDPFTYEDPNEAVREF 615

  Fly  1064 --------VLLER-IGRGNFGDVYKAKLK---STKLDVAVKTCRMTLPDEQKRKFLQEGRILKQY 1116
                    |.:|: ||.|.||:|....||   ..::.||:||.:....::|:|.||.|..|:.|:
Zfish   616 AKEIDISCVKIEQVIGAGEFGEVCSGNLKLPGKREMFVAIKTLKSGYTEKQRRDFLSEASIMGQF 680

  Fly  1117 DHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNC 1181
            ||||::.|.|:..:..|:||:.|.:..|||.::||:|....|..|.:||.|..|:||:||...|.
Zfish   681 DHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLADMNY 745

  Fly  1182 IHRDLAARNCLVDLEHSVKISDFGMSREEEE------YIVSDGMKQIPVKWTAPEALNFGKYTSL 1240
            :||||||||.||:.....|:||||:||..|:      |..:.|.| ||::||||||:.:.|:||.
Zfish   746 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK-IPIRWTAPEAIQYRKFTSA 809

  Fly  1241 CDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRP 1305
            .|||||||:|||:.|.|:.||..|||......|:..||:|.|...|..:::|||.||..|..:||
Zfish   810 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNNRP 874

  Fly  1306 HFDEIYNVVDALILRLDNS 1324
            .|.:|.|.:|.:| |..||
Zfish   875 KFSQIVNNLDKMI-RNPNS 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 19/108 (18%)
TyrKc 1063..1311 CDD:197581 113/268 (42%)
PTKc_Fes_like 1067..1315 CDD:270637 113/257 (44%)
ephb2bNP_001314672.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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