DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and fer

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_012818421.1 Gene:fer / 549656 XenbaseID:XB-GENE-1015488 Length:822 Species:Xenopus tropicalis


Alignment Length:1321 Identity:352/1321 - (26%)
Similarity:521/1321 - (39%) Gaps:522/1321 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFSSALQSRAAHEALIVRQDAELRLMETMKRSIQMKAKCDKEYAISLTAVAQQ-----GLKIDR 60
            |||...|  |::|:||:..||.||||:||:|:.:.::.|.|||||.:|..:..|     .|.:|.
 Frog     1 MGFGKEL--RSSHDALLKLQDWELRLLETVKKFMALRIKSDKEYASTLQNLCNQMDKESALPLDY 63

  Fly    61 ADEMQGSLISKSWRSYMDELDHQAKQFKFNAEQLEV-VCDKLTHLSQDKRKARKAYQEEHAKIAA 124
            .     |.:|.||...:.:.:..:|..|.:||:|.. ...:||.|.:||:..:|:|...|.:|.|
 Frog    64 I-----SNVSNSWLHLVQQTEQLSKIMKTHAEELNAGPLHRLTTLIKDKQHVKKSYNNIHQQIEA 123

  Fly   125 RLNHLT-DEVVRKKSEYQKHLEGYKALRTRFEENYIKAPSRSGRKLDDVRDKYQKACRKLHLTHN 188
            .:|.:: .|:.:.||.|::..:...:.:.:|     |..|..|::.:..||:|.||..|||:.||
 Frog   124 EMNKVSKTELEKLKSSYKQLTKEVNSAKEKF-----KDASTKGKETEKARDRYDKANMKLHILHN 183

  Fly   189 EYVLSITEAIEVEKDFRNVLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKYKEIQKRID 253
            :|||::..|...:..:.:..||.||:..|.:||..|...:.|..|..|...|.:::...:.|.::
 Frog   184 QYVLAVKGAQLHQHQYYDSTLPLLLDSLQKMQEEMIQALKGIFAEYCQITSLVSEEIVAVHKELE 248

  Fly   254 TVIGSINPTEEYGEFTEKYKTSPTTPLLFQFDETLIQDIPGKLQSSTLTVDNLTVDWLRNRLQEL 318
            |.:..|||:.||..|.||::|..|.....:||.:|:::|. .||::.:..:|||.|.|.:.|:. 
 Frog   249 TCVEEINPSTEYENFIEKHRTEETREPDIEFDTSLLEEIE-NLQANEIMWNNLTADSLNSMLKT- 311

  Fly   319 EGAVRDCQEKQMKMIEHVNGGSPVANGSIISNGSNTSNGIQSNKDSLCRQSKDLNALRCQEKQKQ 383
              |..:..:.|..::                                           .:|:|..
 Frog   312 --ATEELSQTQQSLL-------------------------------------------TKEEQLS 331

  Fly   384 KLVDMIKCALNEVGCEELPSGCDDDLTLEQNFIENGYNNEQQRSNSTSSPGLGIMNELMRRGGVL 448
            ||         ||..||..|.|:                                          
 Frog   332 KL---------EVNLEESASTCE------------------------------------------ 345

  Fly   449 TLLRGRGRHFKRKSTPQPATPMTRSRQGRFNKLQPRSQSLGSLSVIRDGNGPSPARYEPITNHRL 513
                       :||                                                   
 Frog   346 -----------KKS--------------------------------------------------- 348

  Fly   514 RQAASVHYLGEEIATSSTNPPDLTRLRRTQCSMLCLGEDEEPVVLASPAPLTQLTAAVLTNTNNN 578
                                                    :.|:|     |:|..|.        
 Frog   349 ----------------------------------------DAVLL-----LSQKQAI-------- 360

  Fly   579 HIYADLELDKKKDTSPSPECKGEQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKR 643
                                  |:::...||::...::.:.|..:             ||.::  
 Frog   361 ----------------------EELKQSIEQLKCAESKLSAQKML-------------LDQKI-- 388

  Fly   644 TLQPSDDVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLSFSQKSISN 708
                          ::|.      .|:|..                                   
 Frog   389 --------------QQNE------GKEPPP----------------------------------- 398

  Fly   709 IFSNLKEFSKSPLVRMGKNHILNEEQDAKRTQPSQHHHSSGSDCPTNSSSSSSNNNNNNKNTSSN 773
                                ::|.|:||:                                    
 Frog   399 --------------------VVNYEEDAR------------------------------------ 407

  Fly   774 SNHSASQSTIITSTITTTITTTTTTTPSKENSRLKFKVPKIQKKSKAIR-NTFRSKLLNFQLKRS 837
                                                .|..:.||.|..: :|||..:...     
 Frog   408 ------------------------------------SVCSVDKKEKVSKFDTFRHSIAGI----- 431

  Fly   838 KPCKQCTKRRRIHPSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHPFE 902
                       |...||:.            ||:                               
 Frog   432 -----------IRSPKSML------------GSS------------------------------- 442

  Fly   903 SSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPR 967
                                                   ||...|| :..:||.|::|:||.:||
 Frog   443 ---------------------------------------SLLDGIS-AIEKPLSEQDWYHGAIPR 467

  Fly   968 EEVVRLLNNDGDFLVRETIRNEESQIVLSVCWNG-HKHFIVQTTGEGNFRFEGPPFASIQELIMH 1031
            .|...||...|||||||: ..:..:.||||..:. .:|||:| ..:..:||||..|.:|.:||.|
 Frog   468 VEAQELLKQQGDFLVRES-HGKPGEYVLSVFSDSQRRHFIIQ-FADNQYRFEGTGFPTIPQLIEH 530

  Fly  1032 QYHSELPVTVKSGAILRRPVCRE-RWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCR 1095
            .|.::..:|.|||.:|..||.:: :|.|:::||.|.|.:|:||||:|||..||. |..||||||:
 Frog   531 HYTTKQVITKKSGVVLLNPVVKDKKWILNHEDVTLGELLGKGNFGEVYKGTLKD-KTPVAVKTCK 594

  Fly  1096 MTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTR 1160
            ..||.|.|.|||.|.||||||||.|||||||:|.|:|||.||||||.||..|::|||..:.:.|:
 Frog   595 EDLPQELKIKFLSEARILKQYDHANIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDDMKTK 659

  Fly  1161 QQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIV-SDGMKQIPV 1224
            |......|||:||.|||||||||||||||||||...:.:|||||||||:|::.|. |.|:||||:
 Frog   660 QLAKFSFDAASGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 724

  Fly  1225 KWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEM 1289
            |||||||||:|:|:|..||||:|||:||.||.|..||.||||.:|||:::.||||..|::.|||:
 Frog   725 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSAPQNCPEEV 789

  Fly  1290 YRLMLQCWAADAESRPHFDEI 1310
            :|:|.:||....|:||.|.|:
 Frog   790 FRIMQKCWEYKPENRPKFSEM 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341 78/242 (32%)
SH2_Fps_family 953..1039 CDD:198224 36/86 (42%)
TyrKc 1063..1311 CDD:197581 153/249 (61%)
PTKc_Fes_like 1067..1315 CDD:270637 151/245 (62%)
ferXP_012818421.1 F-BAR_Fer 5..238 CDD:153370 78/244 (32%)
SH2_Fps_family 453..538 CDD:198224 36/86 (42%)
PKc_like 566..815 CDD:389743 151/246 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 311 1.000 Domainoid score I1304
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74300
Inparanoid 1 1.050 564 1.000 Inparanoid score I1074
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D255116at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - otm49294
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3894
SonicParanoid 1 1.000 - - X1749
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.100

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