DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and NTRK1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_002520.2 Gene:NTRK1 / 4914 HGNCID:8031 Length:796 Species:Homo sapiens


Alignment Length:479 Identity:133/479 - (27%)
Similarity:216/479 - (45%) Gaps:102/479 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 PAGQKPVKPSVQISGHKDHPFESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLA- 944
            |.||  ...|: ::...|:|||.:..:....|...:|.     :|.|.|.:..||......|:| 
Human   366 PFGQ--ASASI-MAAFMDNPFEFNPEDPIPVSFSPVDT-----NSTSGDPVEKKDETPFGVSVAV 422

  Fly   945 -----ASISLSTNRPLYEEEWFHGVLPREEVVRLLNNDG---DF-LVRETIRNEESQIVLSVCWN 1000
                 |.:.|||                  ::.:||..|   .| :.|..:...|..:.:|:   
Human   423 GLAVFACLFLST------------------LLLVLNKCGRRNKFGINRPAVLAPEDGLAMSL--- 466

  Fly  1001 GHKHFIV-------QTTGEGNFRFEGPPFASIQELIMH--QYHSELPVTVKSGAILRRPVCRERW 1056
               ||:.       .|.|:|         :.:|..|:.  ||.|:..|    ..|.||       
Human   467 ---HFMTLGGSSLSPTEGKG---------SGLQGHIIENPQYFSDACV----HHIKRR------- 508

  Fly  1057 ELSNDDVVLLERIGRGNFGDVYKAKL-----KSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQY 1116
                 |:||...:|.|.||.|:.|:.     :..|:.||||..: ...:..::.|.:|..:|...
Human   509 -----DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTML 567

  Fly  1117 DHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNG----------------LTTRQQMGM 1165
            .|.:||:..|:|.:.:|:::|.|.:..|.|..:||  |:|                |...|.:.:
Human   568 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR--SHGPDAKLLAGGEDVAPGPLGLGQLLAV 630

  Fly  1166 CRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSRE--EEEYIVSDGMKQIPVKWTA 1228
            ....||||.||...:.:|||||.|||||.....|||.||||||:  ..:|....|...:|::|..
Human   631 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 695

  Fly  1229 PEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLM 1293
            ||::.:.|:|:..||||:|:::||||:.|..|:..::|:.|.:.|..|..:..|::.|.|:|.:|
Human   696 PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIM 760

  Fly  1294 LQCWAADAESRPHFDEIYNVVDAL 1317
            ..||..:.:.|....:::..:.||
Human   761 RGCWQREPQQRHSIKDVHARLQAL 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 17/98 (17%)
TyrKc 1063..1311 CDD:197581 88/270 (33%)
PTKc_Fes_like 1067..1315 CDD:270637 86/270 (32%)
NTRK1NP_002520.2 leucine-rich repeat 68..92 CDD:275378
LRR 1 90..113
LRR_8 92..150 CDD:290566
leucine-rich repeat 93..116 CDD:275378
LRR 2 116..137
leucine-rich repeat 117..139 CDD:275378
leucine-rich repeat 140..152 CDD:275378
TPKR_C2 151..192 CDD:293525
Ig_TrkABC_d4 195..282 CDD:143173
Ig_TrKABC_d5 299..379 CDD:143172 4/15 (27%)
Interaction with SQSTM1. /evidence=ECO:0000250 469..490 4/29 (14%)
PTKc_TrkA 504..783 CDD:270674 92/293 (31%)
Pkinase_Tyr 510..781 CDD:285015 88/273 (32%)
DXXLL. /evidence=ECO:0000269|PubMed:26446845 537..541 1/3 (33%)
DXXLL. /evidence=ECO:0000269|PubMed:26446845 607..611 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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