DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and syk

DIOPT Version :10

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_005155595.1 Gene:syk / 405769 ZFINID:ZDB-GENE-040702-3 Length:608 Species:Danio rerio


Alignment Length:522 Identity:157/522 - (30%)
Similarity:242/522 - (46%) Gaps:123/522 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 PAGQKPVKPSVQISGHKDHPFESSSGELDENSDRD-IDNDEEEEDSASDD-VLSMKDHCYCVPSL 943
            |.|.:|          |..|||    :|.|...|. ::.....:.||.|. ::|.:      |.|
Zfish   105 PRGTEP----------KVGPFE----DLKEQLIRQYVEQTWNLKGSALDQAIISQR------PQL 149

  Fly   944 AASISLSTNRPLYEEEWFHGVLPREE-VVRLLNN---DGDFLVRE---TIRNEESQIVLSVCWNG 1001
            ...|:.:.:..:   .||||.:.||: .:||||.   :|.||:|:   :.|||...:.| :..|.
Zfish   150 EKLIATTAHEKM---PWFHGKIDREDSELRLLNTSRVNGKFLIRQRENSGRNESYALCL-LHNNQ 210

  Fly  1002 HKHFIVQTTGEGNFRF-EGPPFASIQELIMH-------------------QYHSELPVTVKSGAI 1046
            ..|:.:.....|.... :|..|.::.:|:.|                   .:|||...|   |.|
Zfish   211 VMHYRIDKDRAGKLSIPDGKKFDTLWQLVEHYSYKPDGLLRVLTETCPRPSHHSERGAT---GGI 272

  Fly  1047 LRR-----------------------------------------PVCRERWE------------- 1057
            :.|                                         |:..:.:|             
Zfish   273 ISRLKSYSFPKPGQKKGSAENPYKITPNGKDDYSKQGNFLDSAMPMDTQVYESPYADPDELRSTK 337

  Fly  1058 LSNDDVVLLE-RIGRGNFGDVYKA--KLKSTKLDVAVKTCRMTLPDEQ---KRKFLQEGRILKQY 1116
            ::..|:.|.: .:|.||||.|.:.  ::|.|:..||||..:.  .|:.   |.:.|:|..:::|.
Zfish   338 VNRSDLTLEDGELGSGNFGTVLRGVYQMKKTQKVVAVKILKN--DDDNAAVKDEMLREANVMQQL 400

  Fly  1117 DHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNC 1181
            |:|.||::|||| :.:.:|:||||...|.|..:|:||.: :|.:....:....:.||:|||..|.
Zfish   401 DNPYIVRMIGIC-EAENLMLVMELAELGPLHKFLQKNKH-ITVKNLTELVHQVSMGMKYLEEHNF 463

  Fly  1182 IHRDLAARNCLVDLEHSVKISDFGMSR---EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDV 1243
            :||||||||.|:..:|..||||||:|:   |:|.|..:.|..:.|:||.|||.:|:.|::|..||
Zfish   464 VHRDLAARNVLLVTQHYAKISDFGLSKALTEDENYYKAKGHGKWPLKWYAPECMNYLKFSSKSDV 528

  Fly  1244 WSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFD 1308
            ||:|:||||.||.|..||.||..:...:.|:.|.||..|...|.|||.||.:||....:.||.|.
Zfish   529 WSFGVLMWEAFSYGQKPYKGMKGNEVIQMIENGQRMSAPPDCPPEMYDLMKKCWTYKPDERPGFS 593

  Fly  1309 EI 1310
            .:
Zfish   594 VV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 28/112 (25%)
PTKc_Fes_like 1067..1315 CDD:270637 104/253 (41%)
sykXP_005155595.1 SH2_N-SH2_Zap70_Syk_like 8..111 CDD:198191 3/15 (20%)
SH2_C-SH2_Syk_like 159..260 CDD:198264 25/104 (24%)
PTKc_Syk 348..604 CDD:133247 104/252 (41%)
Blue background indicates that the domain is not in the aligned region.

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