DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and grap2b

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_956972.1 Gene:grap2b / 393651 ZFINID:ZDB-GENE-040426-1485 Length:249 Species:Danio rerio


Alignment Length:302 Identity:53/302 - (17%)
Similarity:103/302 - (34%) Gaps:89/302 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 ECRSSKDTSHSKKRSLSFSQKSISNIFSNLKEFSKSPLVRM----GKNHILNEEQDAKRTQPSQH 744
            |.....|.|.:....|||.:..:..|.....::.::.:..|    .:|:|:.       |.||.:
Zfish     2 EATGKYDFSATAGDELSFRKGDVIKILGTNDDWFRAEINGMEGFVPRNYIVT-------TFPSWY 59

  Fly   745 HHSSGSDCPTNSSSSSSNNNNNNKNTSSNSNHSASQSTIITSTITTTITTTTTTTPS-------K 802
                                  .:|||..|    :|..::...|...|...:.::|.       .
Zfish    60 ----------------------KENTSRQS----AQDELMCQPIGAFIIRGSQSSPGDFSISVRH 98

  Fly   803 ENSRLKFKVPKIQKKSKAIRN---TFRSKLLNFQLKRSKPCKQCTKRRRIH---PSKSVFDFAKE 861
            ||....|||.:.::....:.:   |..:||:::....|     .:|:.|:.   ..:|..||...
Zfish    99 ENDVQHFKVMRDRQGRYYLWSEMFTSLNKLVDYYTHNS-----ISKQSRVFLLTDQRSSSDFLHR 158

  Fly   862 FEVEQPAGSAADEQFCNCPPAGQKPVKPSV--QISG-HKDHPFESSSGELDENSDRDIDNDEEEE 923
            ...|.|......:.:.:..|...:|.:||:  |:|. |....::.::            .|.:|.
Zfish   159 KPTEAPPFRQERQDYRSLAPPVARPSQPSLPPQVSALHVRAMYDFTA------------EDADEL 211

  Fly   924 DSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVL 965
            :..:.||:.:.|..                   :..|:.|||
Zfish   212 NFQAGDVIEVLDQS-------------------DRSWWKGVL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 4/13 (31%)
TyrKc 1063..1311 CDD:197581
PTKc_Fes_like 1067..1315 CDD:270637
grap2bNP_956972.1 SH3 2..51 CDD:302595 9/48 (19%)
SH2_Grb2_like 54..147 CDD:199828 22/123 (18%)
SH3 197..248 CDD:302595 9/69 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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