DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and LCK

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_024302814.1 Gene:LCK / 3932 HGNCID:6524 Length:567 Species:Homo sapiens


Alignment Length:396 Identity:140/396 - (35%)
Similarity:209/396 - (52%) Gaps:57/396 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   955 LYEEEWFHGVLPREEVVRLL----NNDGDFLVRE----------TIRN---EESQIVLSVCWNGH 1002
            |..|.||...|.|::..|.|    |..|.||:||          ::|:   .:.::|        
Human   180 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV-------- 236

  Fly  1003 KHFIVQTTGEGNFRFEGP--PFASIQELIMHQYHSELPVTVKSGAILRRPVCR----------ER 1055
            ||:.::....|.| :..|  .|..:.||:.|..::...:..:    |.|| |:          :.
Human   237 KHYKIRNLDNGGF-YISPRITFPGLHELVRHYTNASDGLCTR----LSRP-CQTQKPQKPWWEDE 295

  Fly  1056 WELSNDDVVLLERIGRGNFGDVYKAKLKS-TKLDVAVKTCRM--TLPDEQKRKFLQEGRILKQYD 1117
            ||:..:.:.|:||:|.|.||:|:...... ||  ||||:.:.  ..||    .||.|..::||..
Human   296 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPD----AFLAEANLMKQLQ 354

  Fly  1118 HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSN-GLTTRQQMGMCRDAAAGMRYLESKNC 1181
            |..:|:|..: |.::||.|:.|.:..|||:.:|:..|. .||..:.:.|....|.||.::|.:|.
Human   355 HQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 418

  Fly  1182 IHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVW 1244
            |||||.|.|.||....|.||:|||::|  |:.||...:|.| .|:|||||||:|:|.:|...|||
Human   419 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKWTAPEAINYGTFTIKSDVW 482

  Fly  1245 SYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDE 1309
            |:|||:.||.:.|..||.||||....:.::.||||..|.:.|||:|:||..||....|.||.||.
Human   483 SFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 547

  Fly  1310 IYNVVD 1315
            :.:|::
Human   548 LRSVLE 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 25/102 (25%)
TyrKc 1063..1311 CDD:197581 108/253 (43%)
PTKc_Fes_like 1067..1315 CDD:270637 108/253 (43%)
LCKXP_024302814.1 SH3_Lck 123..176 CDD:212938
SH2_Src_Lck 181..281 CDD:198225 25/112 (22%)
PTKc_Lck_Blk 295..558 CDD:270652 111/267 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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