DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Itk

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001102295.2 Gene:Itk / 363577 RGDID:1311618 Length:620 Species:Rattus norvegicus


Alignment Length:650 Identity:183/650 - (28%)
Similarity:288/650 - (44%) Gaps:110/650 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   727 NHILNEEQDAKRTQPSQHHHSSGSDCP------TNSSSSSSNNNNNNKNTSSNSNHSASQS--TI 783
            |.||.|||..|::|  |...:|.|:..      |.:|.:...:.:..|.|...|...:...  .|
  Rat     3 NFILLEEQLIKKSQ--QKRRTSPSNFKVRFFVLTKASLAYFEDRHGKKRTLKGSIELSRIKCVEI 65

  Fly   784 ITSTITTTITTTTTTTPSKENSRLKFKVPKIQKKSKAI---------RNTFRSKL-LNFQLKRSK 838
            :.|.|:.............:|..|....|..:.:.:.:         .|:..||. .||.:....
  Rat    66 VKSDISIPCHYKYPFQVMHDNYLLYVFAPDCESRQRWVLTLKEETRNNNSLVSKYHPNFWMDGRW 130

  Fly   839 PCKQCTKRRRIHPSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHK-DHPFE 902
            .|  |::..::....:.:|..|.                    |.:||:.|:.:.:... ..|.|
  Rat   131 RC--CSQLEKLAVGCAPYDPTKN--------------------ASKKPLPPTPEDNRRSFQEPEE 173

  Fly   903 S---SSGELDENSDRDIDNDEEEE----DSASDDVLSMKD---HCYCVPSLAASISLSTNRPLYE 957
            :   :..:...|..:::....:||    ||:......::|   |....|| :..:..|.| .|..
  Rat   174 TLVIALYDYQTNDPQELALRRDEEYYLLDSSEIHWWRVQDKNGHEGYAPS-SYLVEKSPN-SLET 236

  Fly   958 EEWFHGVLPREEVVRLL---NNDGDFLVRET--------------IRNEESQIVLSVCWNGHKHF 1005
            .||::..:.|::..:||   ..:|.|:||::              |.:|.:..:        ||:
  Rat   237 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENNPCI--------KHY 293

  Fly  1006 IVQTTGEGNFRF---EGPPFASIQELIM-HQYHSELPVTVKSGAILRRPVCRER----------- 1055
            .::.|.:...|:   |...|.||..||. |||:....||     .||.|||..|           
  Rat   294 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVT-----RLRYPVCSWRQKAPVTAGLRY 353

  Fly  1056 --WELSNDDVVLLERIGRGNFGDVYKAK-LKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYD 1117
              |.:...::..::.||.|.||.|:... |...|  ||:||.:.....|:  .|::|..::.:..
  Rat   354 GKWVIQPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIQEGAMSEE--DFIEEAEVMMKLS 414

  Fly  1118 HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCI 1182
            ||.:|:|.|:|:::.||.:|.|.:..|.|..|||...........:|||.|...||.|||....|
  Rat   415 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKACVI 479

  Fly  1183 HRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWS 1245
            |||||||||||.....:|:|||||:|  .:::|..|.|.| .||||.:||..:|.:|:|..||||
  Rat   480 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWASPEVFSFSRYSSKSDVWS 543

  Fly  1246 YGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            :|:||||:||:|..||...:||...|.|.||:|:..|:.....:|::|..||....|.||.|..:
  Rat   544 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASPHVYQVMNHCWKEKPEDRPPFSRL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 25/106 (24%)
TyrKc 1063..1311 CDD:197581 101/250 (40%)
PTKc_Fes_like 1067..1315 CDD:270637 101/246 (41%)
ItkNP_001102295.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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