DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and musk

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001004503.1 Gene:musk / 334526 ZFINID:ZDB-GENE-030131-6458 Length:941 Species:Danio rerio


Alignment Length:368 Identity:106/368 - (28%)
Similarity:183/368 - (49%) Gaps:61/368 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   993 IVLSVC------WNGHKHFIVQTTGEGNFRFEGPPFASI-QELIMHQYH-----SELPVTVKSGA 1045
            :::.:|      |...|..:::|          |...:: .||::.:.|     ..||:.:.|..
Zfish   582 VLILMCHRRKKMWKKRKSRVLET----------PTLTTLPSELLLDRLHPNPMYQRLPLLLNSKL 636

  Fly  1046 ILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAK---LKSTK--LDVAVKTCRMTLPDEQKRK 1105
            :        ..|...:::..:..||.|.||.|::|:   |..|:  ..||||..:.....:.:..
Zfish   637 L--------SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPTEPFTMVAVKMLKEEASTDMQND 693

  Fly  1106 FLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRK--------------NSNG 1156
            |.:|..::.::||||||:|:|:|...:|:.::.|.:..|.|..:||:              .|:.
Zfish   694 FQREAALMSEFDHPNIVRLLGVCAVGKPMCLMFEYMAYGDLNEFLRRRCATQQPSLSRDTLTSSS 758

  Fly  1157 LTT----------RQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSRE-- 1209
            |.:          ::|:.:.:..||||.||..:..:|||||.|||||.....|||:|||:||.  
Zfish   759 LVSEPERYPPLSCQEQLSISKQVAAGMAYLSERKFVHRDLATRNCLVAENLVVKIADFGLSRNIY 823

  Fly  1210 EEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERID 1274
            ..:|..:.....||::|..||::.:.:|||..|||:||:::|||||.|..||.||.:......:.
Zfish   824 AADYYKASENDAIPIRWMPPESIFYNRYTSESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR 888

  Fly  1275 TGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVVDAL 1317
            .|..:..|::.|:|:|.||..||:.....||.|..|:.:::.:
Zfish   889 DGNVLSCPENCPQELYNLMRLCWSGHPTDRPSFASIHRILERM 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 9/57 (16%)
TyrKc 1063..1311 CDD:197581 93/278 (33%)
PTKc_Fes_like 1067..1315 CDD:270637 94/278 (34%)
muskNP_001004503.1 I-set 26..108 CDD:254352
Ig 37..108 CDD:299845
IG_like 124..205 CDD:214653
Ig 136..198 CDD:299845
I-set 210..298 CDD:254352
Ig 212..300 CDD:299845
CRD_TK_ROR_related 309..449 CDD:143578
KR 454..536 CDD:214527
PTKc_Musk 640..930 CDD:133181 95/289 (33%)
Pkinase_Tyr 646..928 CDD:285015 94/281 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.