DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and src

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_017209008.1 Gene:src / 325084 ZFINID:ZDB-GENE-030131-3809 Length:549 Species:Danio rerio


Alignment Length:416 Identity:142/416 - (34%)
Similarity:214/416 - (51%) Gaps:53/416 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   926 ASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLL----NNDGDFLVRETI 986
            |..|.:..:||.               |...|:.|:.|.:.|.:..|||    |..|.|||||: 
Zfish   145 APSDSIQAEDHL---------------RLTLEKRWYFGKITRRDSERLLLNLENRRGTFLVRES- 193

  Fly   987 RNEESQIVLSVCWNGH------KHFIVQTTGEGNFRFEG-PPFASIQELIMH--QY-----HSEL 1037
            ...:....|||....:      ||:.::....|.|.... ..|:::|:|:.|  |:     ||..
Zfish   194 ETTKGAYCLSVLDYDNVKGLNVKHYKIRKLDSGGFYITSRTQFSTLQQLVNHYRQHADGLCHSLT 258

  Fly  1038 PVTVKSGAILRRP---VCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRM-TL 1098
            .|.    .:|:.|   :.|:.||:..|.:.|..::|:|.||:|:......| ..||:||.:. |:
Zfish   259 DVC----PVLKPPTQGLARDAWEIPRDSLRLDVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM 318

  Fly  1099 PDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTR--Q 1161
            ..|   .||||.:::|:..|..:|:|..: |.::||.||.|.:..||||.:| |...|...|  |
Zfish   319 SPE---AFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMGQGSLLDFL-KGDMGKMLRLPQ 378

  Fly  1162 QMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPV 1224
            .:.|....|:||.|:|..|.:||||.|.|.||......|::|||::|  |:.||....|.| .|:
Zfish   379 LVDMASQIASGMAYVERMNYVHRDLRAANILVGDNLVCKVADFGLARLIEDNEYTARQGAK-FPI 442

  Fly  1225 KWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEM 1289
            |||||||..:|::|...||||:|||:.|:.:||..||.||.|....::::.|||||.|...|:.:
Zfish   443 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPAECPDSL 507

  Fly  1290 YRLMLQCWAADAESRPHFDEIYNVVD 1315
            :.|||.||..:.|.||.|:.:...::
Zfish   508 HELMLTCWRKEPEERPTFEYLQGFLE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 29/103 (28%)
TyrKc 1063..1311 CDD:197581 102/252 (40%)
PTKc_Fes_like 1067..1315 CDD:270637 101/252 (40%)
srcXP_017209008.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.