DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Wsck

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster


Alignment Length:280 Identity:68/280 - (24%)
Similarity:121/280 - (43%) Gaps:39/280 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1053 RERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKL--DVAVKT-CRMTLPDEQKRKFLQEGR--- 1111
            |....|:.:||     ||.|.||::...|:.:...  |..:.. |...|....:.:.|:|.|   
  Fly   488 RNALRLNVNDV-----IGDGRFGEIITGKVSTNDFARDCTLHVLCLDDLNGTTQAQLLRELRQLS 547

  Fly  1112 ILKQYDHPNIVKLIGICVQKQPIMIVME---LVLGGSLL-TYLRKNSNGLTTRQQMGMCR---DA 1169
            .||:.:|  ::...|:........::.|   :.|...|: :.|...|..||:..:..:.:   :.
  Fly   548 QLKRQEH--LLDFYGVSASPDWFYLIFEQQRMSLKRKLVESRLMAPSPRLTSLSEQLVLQWIYEL 610

  Fly  1170 AAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFG------MSREEEEYIVSDGMKQIPVKWTA 1228
            |:.|.||.|...:||.|.:.:..|..:..:|:|.||      ::|::.::          .:|.|
  Fly   611 ASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFGPLPYMNIARQQPDH----------NRWLA 665

  Fly  1229 PEALNFGKYTSL-CDVWSYGILMWEIFSKGDTPYSG--MTNSRARERIDTGYRMPTPKSTPEEMY 1290
            ||.|....:.|. .||||...:.||..:.|.|||:.  .:|.:..|.|....|...|.....::|
  Fly   666 PEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAVASNQQLLEAIRAAVRPAQPAYVYGDLY 730

  Fly  1291 RLMLQCWAADAESRPHFDEI 1310
            :|:|.||..:...|...:::
  Fly   731 QLLLNCWQLEPSERSSCEDV 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581 65/270 (24%)
PTKc_Fes_like 1067..1315 CDD:270637 64/266 (24%)
WsckNP_733018.1 WSC 42..115 CDD:280068
fn3 130..222 CDD:278470
TyrKc 493..746 CDD:197581 67/269 (25%)
PTKc 497..750 CDD:270623 66/269 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24418
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.